RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PKD1P98161 4303 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
CPNE1-222ENST00000473373 IGHV3-38A0A0C4DH36 116 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 ZNF56Q15929 161 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 PIK3CD-AS1Q5SR53 167 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 COX8CQ7Z4L0 72 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 MED9Q9NWA0 146 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
CPNE1-222ENST00000473373 K7EP13 123 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 PDE6DO43924 150 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 IGHV3-30P01768 117 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 IGHV3-33P01772 117 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 SMIM17P0DL12 118 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 IGHV3-30-5P0DP03 117 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 GNG4P50150 75 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 CCL20P78556 96 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 MEF2BQ02080 365 aaPredicted RBP7.86□□□□□ -1.15
CPNE1-222ENST00000473373 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 DNLZQ5SXM8 178 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.86□□□□□ -1.15
CPNE1-222ENST00000473373 SAMD10Q9BYL1 202 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 GTSF1LQ9H1H1 148 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 URGCP-MRPS24S4R325 110 aa7.86□□□□□ -1.15
CPNE1-222ENST00000473373 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 MUC21A0A0G2JKD1 596 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 MUC21A0A140T8X8 626 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 F5H697 171 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 LELP1Q5T871 98 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 KCNIP4Q6PIL6 250 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 C14orf178Q8N769 122 aaPredicted RBP7.85□□□□□ -1.15
CPNE1-222ENST00000473373 SFRP2Q96HF1 295 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 DERL1Q9BUN8 251 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 Q9HAA7 133 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 TNFRSF18Q9Y5U5 241 aa7.85□□□□□ -1.15
CPNE1-222ENST00000473373 XKRY2A2RUG3 117 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 BCL2P10415 239 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 TAGLN2P37802 199 aaKnown RBP7.84□□□□□ -1.15
CPNE1-222ENST00000473373 TIRAPP58753 221 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 RPL36AP83881 106 aaKnown RBP7.84□□□□□ -1.15
CPNE1-222ENST00000473373 ALKAL2Q6UX46 152 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 Q6ZSN1 163 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 RPL36ALQ969Q0 106 aaKnown RBP7.84□□□□□ -1.15
CPNE1-222ENST00000473373 C11orf52Q96A22 123 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 VAX2Q9UIW0 290 aa7.84□□□□□ -1.15
CPNE1-222ENST00000473373 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 P01737 135 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 CEBPGP53567 150 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
CPNE1-222ENST00000473373 BLOC1S1P78537 153 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 OR10AG1Q8NH19 301 aa7.83□□□□□ -1.16
CPNE1-222ENST00000473373 A0A087WWC5 75 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 MGPP08493 103 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 CXCL1P09341 107 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 LINC01556Q5JQF7 62 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 AP1S3Q96PC3 154 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 MLST8Q9BVC4 326 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 SCRT2Q9NQ03 307 aa7.82□□□□□ -1.16
CPNE1-222ENST00000473373 GZMBP10144 247 aa7.81□□□□□ -1.16
CPNE1-222ENST00000473373 FER1L6-AS1Q8NA97 138 aa7.81□□□□□ -1.16
CPNE1-222ENST00000473373 SMIM12Q96EX1 92 aa7.81□□□□□ -1.16
CPNE1-222ENST00000473373 OR5AL1P0C617 328 aa7.8□□□□□ -1.16
CPNE1-222ENST00000473373 NKX2-5P52952 324 aaPredicted RBP7.8□□□□□ -1.16
CPNE1-222ENST00000473373 RAB4BP61018 213 aa7.8□□□□□ -1.16
CPNE1-222ENST00000473373 TOR2AQ5JU69 321 aa7.8□□□□□ -1.16
CPNE1-222ENST00000473373 EIF5A2Q9GZV4 153 aaKnown RBP7.8□□□□□ -1.16
CPNE1-222ENST00000473373 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 A0A087WX48 190 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 TMEM262E9PQX1 116 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 SNAI2O43623 268 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 UFSP1Q6NVU6 142 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
CPNE1-222ENST00000473373 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
CPNE1-222ENST00000473373 A0A087WTM6 91 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 IBA57-AS1B1ANH7 110 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 TRGC1P0CF51 173 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 KRTAP10-2P60368 255 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 CACNG7P62955 275 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 Q9UF83 564 aa7.78□□□□□ -1.16
CPNE1-222ENST00000473373 TRAV8-3A0A0A6YYJ7 113 aa7.77□□□□□ -1.17
CPNE1-222ENST00000473373 F2Z2F3 143 aa7.77□□□□□ -1.17
CPNE1-222ENST00000473373 H7C1H1 209 aa7.77□□□□□ -1.17
CPNE1-222ENST00000473373 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPNE1-222ENST00000473373 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
CPNE1-222ENST00000473373 RMI2Q96E14 147 aa7.77□□□□□ -1.17
CPNE1-222ENST00000473373 SSBP4Q9BWG4 385 aaPredicted RBP7.77□□□□□ -1.17
CPNE1-222ENST00000473373 HSPG2P98160 4391 aa7.76□□□□□ -1.17
CPNE1-222ENST00000473373 A0A1B0GVG6 124 aa7.76□□□□□ -1.17
CPNE1-222ENST00000473373 IGLV2-8P01709 118 aa7.76□□□□□ -1.17
CPNE1-222ENST00000473373 CRPP02741 224 aa7.76□□□□□ -1.17
CPNE1-222ENST00000473373 LINC00694P0DN24 101 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms