RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PSCAO43653 123 aa6.05□□□□□ -1.44
USF1-204ENST00000472217 FAM74A4Q5TZK3 123 aa6.05□□□□□ -1.44
USF1-204ENST00000472217 Q8N3U1 123 aa6.05□□□□□ -1.44
USF1-204ENST00000472217 C14orf178Q8N769 122 aaPredicted RBP6.05□□□□□ -1.44
USF1-204ENST00000472217 Q9HAA7 133 aa6.05□□□□□ -1.44
USF1-204ENST00000472217 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 KANTRA0A1W2PQU2 76 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 M0R381 172 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 RHODO00212 210 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 TPT1P13693 172 aaKnown RBP6.04□□□□□ -1.44
USF1-204ENST00000472217 KRTAP10-1P60331 282 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 PHLDA3Q9Y5J5 127 aa6.04□□□□□ -1.44
USF1-204ENST00000472217 A0A087WWL8 130 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 LRCOL1A6NCL2 159 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 PFDN1O60925 122 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 LAGE3Q14657 143 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 TMUB2Q71RG4 321 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 ZFP82Q8N141 532 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 HSPG2P98160 4391 aa6.03□□□□□ -1.44
USF1-204ENST00000472217 LRP1BQ9NZR2 4599 aa6.02□□□□□ -1.45
USF1-204ENST00000472217 A0A087WWC5 75 aa6.02□□□□□ -1.45
USF1-204ENST00000472217 S100A9P06702 114 aaKnown RBP6.02□□□□□ -1.45
USF1-204ENST00000472217 XGP55808 180 aa6.02□□□□□ -1.45
USF1-204ENST00000472217 EIF5AP63241 154 aaKnown RBP6.02□□□□□ -1.45
USF1-204ENST00000472217 RPL19P84098 196 aaKnown RBP6.02□□□□□ -1.45
USF1-204ENST00000472217 DAZ4Q86SG3 579 aaKnown RBP6.02□□□□□ -1.45
USF1-204ENST00000472217 DAZ3Q9NR90 486 aaKnown RBP6.02□□□□□ -1.45
USF1-204ENST00000472217 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 GCSHP23434 173 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 PRR27Q6MZM9 219 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 BAGE2Q86Y30 109 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 Q8N814 137 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 OR10AG1Q8NH19 301 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
USF1-204ENST00000472217 DERL1Q9BUN8 251 aa6.01□□□□□ -1.45
USF1-204ENST00000472217 TRAV8-3A0A0A6YYJ7 113 aa6□□□□□ -1.45
USF1-204ENST00000472217 EPM2AB3EWF7 344 aa6□□□□□ -1.45
USF1-204ENST00000472217 CXCL1P09341 107 aa6□□□□□ -1.45
USF1-204ENST00000472217 RPL35P42766 123 aaKnown RBP6□□□□□ -1.45
USF1-204ENST00000472217 CCL20P78556 96 aa6□□□□□ -1.45
USF1-204ENST00000472217 WFDC2Q14508 124 aa6□□□□□ -1.45
USF1-204ENST00000472217 TM2D2Q9BX73 214 aa6□□□□□ -1.45
USF1-204ENST00000472217 MANBALQ9NQG1 85 aa6□□□□□ -1.45
USF1-204ENST00000472217 GNG13Q9P2W3 67 aa6□□□□□ -1.45
USF1-204ENST00000472217 TRBV7-3A0A075B6L6 115 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 TRAV1-1A0A0B4J248 108 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 MUC21A0A0G2JKD1 596 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 TRBV10-1A0A0K0K1A3 114 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 MUC21A0A140T8X8 626 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 A6NJY4 79 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 SNAI2O43623 268 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 UBE2D3P61077 147 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 UBE2D2P62837 147 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 RPL36AP83881 106 aaKnown RBP5.99□□□□□ -1.45
USF1-204ENST00000472217 ZNF56Q15929 161 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 NIT1Q86X76 327 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 RPL36ALQ969Q0 106 aaKnown RBP5.99□□□□□ -1.45
USF1-204ENST00000472217 C11orf52Q96A22 123 aa5.99□□□□□ -1.45
USF1-204ENST00000472217 SSBP4Q9BWG4 385 aaPredicted RBP5.99□□□□□ -1.45
USF1-204ENST00000472217 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
USF1-204ENST00000472217 LECT2O14960 151 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 OR5AL1P0C617 328 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 RAB5CP51148 216 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 RAB4BP61018 213 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 HAMPP81172 84 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 TOR2AQ5JU69 321 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 SPANXN1Q5VSR9 72 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 NEXN-AS1Q8NBZ9 246 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 OR10G8Q8NGN5 311 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 DNAJC30Q96LL9 226 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 URGCP-MRPS24S4R325 110 aa5.98□□□□□ -1.45
USF1-204ENST00000472217 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 IGLV2-8P01709 118 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 SMR3BP02814 79 aaPredicted RBP5.97□□□□□ -1.45
USF1-204ENST00000472217 SULT1A2P50226 295 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 SSTP61278 116 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 CENPWQ5EE01 88 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 Q5VSD8 79 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 EIF5AL1Q6IS14 154 aaKnown RBP5.97□□□□□ -1.45
USF1-204ENST00000472217 TCTE3Q8IZS6 198 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 FRZBQ92765 325 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 TMEM70Q9BUB7 260 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 KLK12Q9UKR0 248 aa5.97□□□□□ -1.45
USF1-204ENST00000472217 A0A087WX48 190 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 TEX46H3BTG2 121 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 IGLC6P0CF74 106 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 GZMBP10144 247 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 GNG4P50150 75 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 MEF2BQ02080 365 aaPredicted RBP5.96□□□□□ -1.46
USF1-204ENST00000472217 UBE2WQ96B02 151 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 AP1S3Q96PC3 154 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 CHCHD7Q9BUK0 85 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 COX11Q9Y6N1 276 aa5.96□□□□□ -1.46
USF1-204ENST00000472217 KIF25-AS1Q9Y6Z4 181 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms