RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 MLST8Q9BVC4 326 aa14.08□□□□□ -0.16
SREBF1-210ENST00000471445 PHLDA3Q9Y5J5 127 aa14.08□□□□□ -0.16
SREBF1-210ENST00000471445 FUSP35637 526 aaKnown RBP eCLIP14.07□□□□□ -0.16
SREBF1-210ENST00000471445 ZFP82Q8N141 532 aa14.07□□□□□ -0.16
SREBF1-210ENST00000471445 Q9UF83 564 aa14.07□□□□□ -0.16
SREBF1-210ENST00000471445 M0R381 172 aa14.06□□□□□ -0.16
SREBF1-210ENST00000471445 CXCL1P09341 107 aa14.06□□□□□ -0.16
SREBF1-210ENST00000471445 FAM74A4Q5TZK3 123 aa14.06□□□□□ -0.16
SREBF1-210ENST00000471445 IGHV3-30P01768 117 aa14.05□□□□□ -0.16
SREBF1-210ENST00000471445 IGHV3-33P01772 117 aa14.05□□□□□ -0.16
SREBF1-210ENST00000471445 IGHV3-30-3P0DP02 117 aa14.05□□□□□ -0.16
SREBF1-210ENST00000471445 IGHV3-30-5P0DP03 117 aa14.05□□□□□ -0.16
SREBF1-210ENST00000471445 A0A087WWL8 130 aa14.04□□□□□ -0.16
SREBF1-210ENST00000471445 RPL19P84098 196 aaKnown RBP14.04□□□□□ -0.16
SREBF1-210ENST00000471445 LAGE3Q14657 143 aa14.04□□□□□ -0.16
SREBF1-210ENST00000471445 BAGE2Q86Y30 109 aa14.04□□□□□ -0.16
SREBF1-210ENST00000471445 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
SREBF1-210ENST00000471445 MANBALQ9NQG1 85 aa14.04□□□□□ -0.16
SREBF1-210ENST00000471445 TRAV1-1A0A0B4J248 108 aa14.03□□□□□ -0.16
SREBF1-210ENST00000471445 TCTE3Q8IZS6 198 aa14.03□□□□□ -0.16
SREBF1-210ENST00000471445 Q8N1X5 172 aa14.03□□□□□ -0.16
SREBF1-210ENST00000471445 LRCOL1A6NCL2 159 aa14.02□□□□□ -0.17
SREBF1-210ENST00000471445 RAB5CP51148 216 aa14.02□□□□□ -0.17
SREBF1-210ENST00000471445 CCL20P78556 96 aa14.02□□□□□ -0.17
SREBF1-210ENST00000471445 Q8N3U1 123 aa14.02□□□□□ -0.17
SREBF1-210ENST00000471445 Q9HAA7 133 aa14.02□□□□□ -0.17
SREBF1-210ENST00000471445 A0A087WWC5 75 aa14.01□□□□□ -0.17
SREBF1-210ENST00000471445 SNAI2O43623 268 aa14.01□□□□□ -0.17
SREBF1-210ENST00000471445 PSCAO43653 123 aa14.01□□□□□ -0.17
SREBF1-210ENST00000471445 RPL35P42766 123 aaKnown RBP14.01□□□□□ -0.17
SREBF1-210ENST00000471445 GNG13Q9P2W3 67 aa14.01□□□□□ -0.17
SREBF1-210ENST00000471445 TRBV10-1A0A0K0K1A3 114 aa14□□□□□ -0.17
SREBF1-210ENST00000471445 SULT1A2P50226 295 aa14□□□□□ -0.17
SREBF1-210ENST00000471445 EIF5AL1Q6IS14 154 aaKnown RBP14□□□□□ -0.17
SREBF1-210ENST00000471445 OR10AG1Q8NH19 301 aa14□□□□□ -0.17
SREBF1-210ENST00000471445 DERL1Q9BUN8 251 aa14□□□□□ -0.17
SREBF1-210ENST00000471445 PRR27Q6MZM9 219 aa13.99□□□□□ -0.17
SREBF1-210ENST00000471445 SSBP4Q9BWG4 385 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-210ENST00000471445 OR5AL1P0C617 328 aa13.98□□□□□ -0.17
SREBF1-210ENST00000471445 KRTAP10-1P60331 282 aa13.98□□□□□ -0.17
SREBF1-210ENST00000471445 TEX46H3BTG2 121 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 C1QBP02746 253 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 UBE2D3P61077 147 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 UBE2D2P62837 147 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 RPL36AP83881 106 aaKnown RBP13.96□□□□□ -0.17
SREBF1-210ENST00000471445 CENPWQ5EE01 88 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 DAZ4Q86SG3 579 aaKnown RBP13.96□□□□□ -0.17
SREBF1-210ENST00000471445 OR10G8Q8NGN5 311 aa13.96□□□□□ -0.17
SREBF1-210ENST00000471445 NTN5Q8WTR8 489 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-210ENST00000471445 RPL36ALQ969Q0 106 aaKnown RBP13.96□□□□□ -0.17
SREBF1-210ENST00000471445 DAZ3Q9NR90 486 aaKnown RBP13.96□□□□□ -0.17
SREBF1-210ENST00000471445 XGP55808 180 aa13.95□□□□□ -0.18
SREBF1-210ENST00000471445 RAB4BP61018 213 aa13.95□□□□□ -0.18
SREBF1-210ENST00000471445 SLC51BQ86UW2 128 aa13.95□□□□□ -0.18
SREBF1-210ENST00000471445 Q8N814 137 aa13.95□□□□□ -0.18
SREBF1-210ENST00000471445 TRBV7-3A0A075B6L6 115 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 TRAV8-3A0A0A6YYJ7 113 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 IGLV2-8P01709 118 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 GCSHP23434 173 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 MEF2BQ02080 365 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-210ENST00000471445 ZNF56Q15929 161 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 TOR2AQ5JU69 321 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 Q6ZNX1 250 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 NIT1Q86X76 327 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 TM2D2Q9BX73 214 aa13.94□□□□□ -0.18
SREBF1-210ENST00000471445 IGLV5-52A0A0A0MRZ9 124 aa13.93□□□□□ -0.18
SREBF1-210ENST00000471445 SPANXN1Q5VSR9 72 aa13.93□□□□□ -0.18
SREBF1-210ENST00000471445 SMIM12Q96EX1 92 aa13.93□□□□□ -0.18
SREBF1-210ENST00000471445 MUC21A0A0G2JKD1 596 aa13.92□□□□□ -0.18
SREBF1-210ENST00000471445 MUC21A0A140T8X8 626 aa13.92□□□□□ -0.18
SREBF1-210ENST00000471445 IFNA1P01562 189 aa13.92□□□□□ -0.18
SREBF1-210ENST00000471445 NEXN-AS1Q8NBZ9 246 aa13.92□□□□□ -0.18
SREBF1-210ENST00000471445 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
SREBF1-210ENST00000471445 C19orf71A6NCJ1 209 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 PDE6DO43924 150 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 IGLC6P0CF74 106 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 BCL2P10415 239 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 WFDC2Q14508 124 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 URGCP-MRPS24S4R325 110 aa13.91□□□□□ -0.18
SREBF1-210ENST00000471445 AP1S3Q96PC3 154 aa13.9□□□□□ -0.18
SREBF1-210ENST00000471445 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
SREBF1-210ENST00000471445 DNAH8Q96JB1 4490 aa13.9□□□□□ -0.19
SREBF1-210ENST00000471445 TRBV20OR9-2A0A075B6H5 130 aa13.89□□□□□ -0.19
SREBF1-210ENST00000471445 RAB19A4D1S5 217 aa13.89□□□□□ -0.19
SREBF1-210ENST00000471445 GNG4P50150 75 aa13.89□□□□□ -0.19
SREBF1-210ENST00000471445 FAT1Q14517 4588 aa13.88□□□□□ -0.19
SREBF1-210ENST00000471445 GZMBP10144 247 aa13.88□□□□□ -0.19
SREBF1-210ENST00000471445 RPS20P60866 119 aaKnown RBP13.88□□□□□ -0.19
SREBF1-210ENST00000471445 C9orf62Q8N4C0 152 aa13.88□□□□□ -0.19
SREBF1-210ENST00000471445 OR2D3Q8NGH3 330 aa13.88□□□□□ -0.19
SREBF1-210ENST00000471445 TRBV6-8A0A0A6YYG3 113 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 FER1L6-AS1Q8NA97 138 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 DAZAP1Q96EP5 407 aaKnown RBP13.87□□□□□ -0.19
SREBF1-210ENST00000471445 MED9Q9NWA0 146 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 VAX2Q9UIW0 290 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 KLK12Q9UKR0 248 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 COX11Q9Y6N1 276 aa13.87□□□□□ -0.19
SREBF1-210ENST00000471445 A0A087WX48 190 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms