RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 TRAV25A0A0B4J276 109 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 C7orf71A4D174 169 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 A8MTW9 85 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 LINC01619G3V211 115 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 K7EQG2 157 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 TNFRSF6BO95407 300 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 NPYP01303 97 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
HDAC8-216ENST00000470998 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
HDAC8-216ENST00000470998 SSTP61278 116 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 ORMDL2Q53FV1 153 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 FAM159AQ6UWV7 190 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 NDUFA11Q86Y39 141 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 Q8N8P6 123 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 OR2K2Q8NGT1 345 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 RNF185Q96GF1 192 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 PHLDA3Q9Y5J5 127 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 A0A0J9YX75 114 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 H3BVH4 76 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 CSN3P07498 182 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 SMIM17P0DL12 118 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 HLA-DRB4P13762 266 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 FCER1GP30273 86 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 IFI27P40305 119 aaPredicted RBP4.22□□□□□ -1.73
HDAC8-216ENST00000470998 CDKN1BP46527 198 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 CMC4P56277 68 aaPredicted RBP4.22□□□□□ -1.73
HDAC8-216ENST00000470998 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 KPRPQ5T749 579 aaPredicted RBP4.22□□□□□ -1.73
HDAC8-216ENST00000470998 POM121L12Q8N7R1 296 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 SPAG8Q99932 426 aaPredicted RBP4.22□□□□□ -1.73
HDAC8-216ENST00000470998 C11orf21Q9P2W6 132 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 HLA-DRB4X5D2U9 266 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 PLXNB1O43157 2135 aa4.22□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV4OR15-8A0A075B7B6 117 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 A0A087WW49 117 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 GAGE12BA1L429 117 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 DLEU1O43261 78 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 SYNJ2BPP57105 145 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 LAGE3Q14657 143 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 BEAN1Q3B7T3 259 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 TMEM95Q3KNT9 176 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 ANXA2RQ3ZCQ2 193 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 Q6ZN92 141 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 OR9G4Q8NGQ1 327 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 PTH2Q96A98 100 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 SMIM2Q9BVW6 85 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 SNHG12Q9BXW3 62 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 EDA2RQ9HAV5 297 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 GOLT1BQ9Y3E0 138 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 CMYA5Q8N3K9 4069 aa4.21□□□□□ -1.74
HDAC8-216ENST00000470998 TENM1Q9UKZ4 2725 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 IGLV2-18A0A075B6J9 118 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 A0A096LNJ9 63 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 H7C1H1 209 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 SIVA1O15304 175 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 IGLL1P15814 213 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 EVI2AP22794 236 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 PLNP26678 52 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 RNASE4P34096 147 aaKnown RBP4.2□□□□□ -1.74
HDAC8-216ENST00000470998 SUMO2P61956 95 aaKnown RBP4.2□□□□□ -1.74
HDAC8-216ENST00000470998 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
HDAC8-216ENST00000470998 FHL3Q13643 280 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 TCTEX1D4Q5JR98 221 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 PRR9Q5T870 116 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 NRACQ8N912 160 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 WFDC9Q8NEX5 89 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 DYNLRB2Q8TF09 96 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 C9orf85Q96MD7 179 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 FAM110AQ9BQ89 295 aa4.2□□□□□ -1.74
HDAC8-216ENST00000470998 ZMAT5Q9UDW3 170 aaKnown RBP4.2□□□□□ -1.74
HDAC8-216ENST00000470998 IGHV1OR15-1A0A075B7D0 117 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 TRAV12-1A0A0B4J245 112 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 TRBV6-5A0A0K0K1A5 114 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 LOC389332A0A1B0GUA5 103 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 G3V4G9 280 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 NCR2O95944 276 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 SLPIP03973 132 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 ZNF688P0C7X2 276 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 COX8AP10176 69 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 CD28P10747 220 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
HDAC8-216ENST00000470998 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
HDAC8-216ENST00000470998 ZNF256Q9Y2P7 627 aaPredicted RBP4.19□□□□□ -1.74
HDAC8-216ENST00000470998 TSSC4Q9Y5U2 329 aaPredicted RBP4.19□□□□□ -1.74
HDAC8-216ENST00000470998 IGHV3-16A0A0C4DH30 117 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.18□□□□□ -1.74
HDAC8-216ENST00000470998 RHODO00212 210 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 DPM2O94777 84 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 CD7P09564 240 aa4.18□□□□□ -1.74
HDAC8-216ENST00000470998 NPSP0C0P6 89 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms