RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 FAM135AQ9P2D6 1515 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 ABCA4P78363 2273 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 TRAV23DV6A0A075B6W5 121 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 CLPSL1A2RUU4 121 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 MCRIP1C9JLW8 97 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 IL5P05113 134 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 AKAIN1P0CW23 69 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 POLR2JP52435 117 aaKnown RBP0.65□□□□□ -2.31
SSB-209ENST00000470621 FXYD4P59646 89 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 UBE2G1P62253 170 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 CATR1Q13166 79 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 S100A7L2Q5SY68 101 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 OR2T2Q6IF00 324 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 LINC00299Q6ZSB3 139 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 PSMG3Q9BT73 122 aaPredicted RBP0.65□□□□□ -2.31
SSB-209ENST00000470621 TMEM14CQ9P0S9 112 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 CITO14578 2027 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 CDK12Q9NYV4 1490 aaPredicted RBP0.65□□□□□ -2.31
SSB-209ENST00000470621 RREB1Q92766 1687 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 DLEC1Q9Y238 1755 aa0.65□□□□□ -2.31
SSB-209ENST00000470621 SHROOM2Q13796 1616 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 TRBV10-1A0A0K0K1A3 114 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 GYPBP06028 91 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 FXYD3Q14802 87 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 C9orf116Q5BN46 136 aaPredicted RBP0.64□□□□□ -2.31
SSB-209ENST00000470621 SPANXN1Q5VSR9 72 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 SLC48A1Q6P1K1 146 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 PLPP5Q8NEB5 264 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 PPDPFLQ8WWR9 84 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 DMAC1Q96GE9 116 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 TMEM141Q96I45 108 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 ATG5Q9H1Y0 275 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 ZNF142P52746 1687 aaPredicted RBP0.64□□□□□ -2.31
SSB-209ENST00000470621 RBBP6Q7Z6E9 1792 aaKnown RBP0.64□□□□□ -2.31
SSB-209ENST00000470621 PEAK1Q9H792 1746 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 ZFYVE16Q7Z3T8 1539 aa0.64□□□□□ -2.31
SSB-209ENST00000470621 A0A087WTM6 91 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 TRAV2A0A0B4J234 112 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 TRAV12-3A0A0B4J271 114 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 SNAPC5O75971 98 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 NDUFB6O95139 128 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 TNFP01375 233 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 CCKP06307 115 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 GNG4P50150 75 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 EFNA4P52798 201 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 RBM3P98179 157 aaKnown RBP0.63□□□□□ -2.31
SSB-209ENST00000470621 WHAMMP3Q1A5X7 153 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 SPATA45Q537H7 98 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 Q56UQ5 140 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 UNQ5815/PRO19632Q6UWF5 114 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 C5orf56Q8N8D9 126 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 SPTSSAQ969W0 71 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 AMELYQ99218 206 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 MRPL57Q9BQC6 102 aaKnown RBP0.63□□□□□ -2.31
SSB-209ENST00000470621 NAA60Q9H7X0 242 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 MRPL35Q9NZE8 188 aaKnown RBP0.63□□□□□ -2.31
SSB-209ENST00000470621 DOCK1Q14185 1865 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 PLXNA1Q9UIW2 1896 aa0.63□□□□□ -2.31
SSB-209ENST00000470621 SNRNP200O75643 2136 aaKnown RBP0.62□□□□□ -2.31
SSB-209ENST00000470621 RBP2P50120 134 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 UBE2D1P51668 147 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 PPP3R1P63098 170 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 MRPL54Q6P161 138 aaKnown RBP0.62□□□□□ -2.31
SSB-209ENST00000470621 LINC00526Q96FQ7 95 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 LINC00474Q9P2X8 69 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 IER3IP1Q9Y5U9 82 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 ESPL1Q14674 2120 aa0.62□□□□□ -2.31
SSB-209ENST00000470621 AFDNP55196 1824 aaKnown RBP0.61□□□□□ -2.31
SSB-209ENST00000470621 PHIPQ8WWQ0 1821 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 ARAP2Q8WZ64 1704 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 NRXN2Q9P2S2 1712 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 KIAA0100Q14667 2235 aaKnown RBP0.61□□□□□ -2.31
SSB-209ENST00000470621 CC2D2AQ9P2K1 1620 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 IGLV3-32A0A0A0MS00 114 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 TCRBV3S1A0A5B6 114 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 C20orf202A1L168 122 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 HIGD1CA8MV81 97 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 SMIM6P0DI80 62 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 CBLN1P23435 193 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 TPPP2P59282 170 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 C9orf153Q5TBE3 101 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 SPTSSBQ8NFR3 76 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 CCL19Q99731 98 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 TCEAL7Q9BRU2 100 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 RPRMQ9NS64 109 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 BLMP54132 1417 aaPredicted RBP0.61□□□□□ -2.31
SSB-209ENST00000470621 CPSF1Q10570 1443 aaKnown RBP0.61□□□□□ -2.31
SSB-209ENST00000470621 NAIPQ13075 1403 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 CASKIN1Q8WXD9 1431 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 PATJQ8NI35 1801 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 ARFGEF1Q9Y6D6 1849 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 SMARCA2P51531 1590 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 SPHKAPQ2M3C7 1700 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 IFT140Q96RY7 1462 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 MRC2Q9UBG0 1479 aa0.61□□□□□ -2.31
SSB-209ENST00000470621 CCNB3Q8WWL7 1395 aa0.6□□□□□ -2.31
SSB-209ENST00000470621 HCG22E2RYF7 251 aa0.6□□□□□ -2.31
SSB-209ENST00000470621 APOC4-APOC2K7ER74 178 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms