RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
NUP58-207ENST00000465068 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 TRGV4A0A0C4DH28 118 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 M0R381 172 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 NUDT3O95989 172 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 CT83Q5H943 113 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 WDR73Q6P4I2 378 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 MSRB1Q9NZV6 116 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 V9GYV3 84 aa9.41□□□□□ -0.9
NUP58-207ENST00000465068 EPPK1P58107 5090 aaKnown RBP9.4□□□□□ -0.9
NUP58-207ENST00000465068 F2Z2F3 143 aa9.4□□□□□ -0.9
NUP58-207ENST00000465068 SOHLH1Q5JUK2 328 aa9.4□□□□□ -0.9
NUP58-207ENST00000465068 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
NUP58-207ENST00000465068 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
NUP58-207ENST00000465068 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
NUP58-207ENST00000465068 A0A087WWL8 130 aa9.39□□□□□ -0.91
NUP58-207ENST00000465068 A0A1W2PPQ1 181 aa9.39□□□□□ -0.91
NUP58-207ENST00000465068 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
NUP58-207ENST00000465068 GYPEP15421 78 aa9.39□□□□□ -0.91
NUP58-207ENST00000465068 ERVFC1-1P60608 527 aa9.39□□□□□ -0.91
NUP58-207ENST00000465068 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
NUP58-207ENST00000465068 PKD1P98161 4303 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 LINC00862A6NCI5 91 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
NUP58-207ENST00000465068 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
NUP58-207ENST00000465068 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 RHODO00212 210 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 ADCYAP1P18509 176 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
NUP58-207ENST00000465068 CACNG7P62955 275 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 Q6ZR54 194 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 GFRA4Q9GZZ7 299 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
NUP58-207ENST00000465068 A8MWL6 223 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 NTF3P20783 257 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 TIRAPP58753 221 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 RHOHQ15669 191 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 UQCC3Q6UW78 93 aa9.36□□□□□ -0.91
NUP58-207ENST00000465068 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
NUP58-207ENST00000465068 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 EVI2AP22794 236 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 CCL18P55774 89 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 RAB4BP61018 213 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 SSTP61278 116 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 ADIRFQ15847 76 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
NUP58-207ENST00000465068 SMIM27A0A1W2PRY6 76 aa9.34□□□□□ -0.91
NUP58-207ENST00000465068 FAM74A4Q5TZK3 123 aa9.34□□□□□ -0.91
NUP58-207ENST00000465068 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
NUP58-207ENST00000465068 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
NUP58-207ENST00000465068 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 M0QY20 66 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 SRIP30626 198 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 PGLYRP4Q96LB8 373 aa9.33□□□□□ -0.92
NUP58-207ENST00000465068 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
NUP58-207ENST00000465068 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
NUP58-207ENST00000465068 C15orf54Q8N8G6 183 aa9.32□□□□□ -0.92
NUP58-207ENST00000465068 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
NUP58-207ENST00000465068 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
NUP58-207ENST00000465068 Q9H8V8 135 aa9.32□□□□□ -0.92
NUP58-207ENST00000465068 UBE2D3P61077 147 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 UBE2D2P62837 147 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 TWIST1Q15672 202 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 UBE2DNLQ8IWF7 75 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
NUP58-207ENST00000465068 PKHD1P08F94 4074 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 PNRC1Q12796 327 aaPredicted RBP9.3□□□□□ -0.92
NUP58-207ENST00000465068 GAGE1Q13065 139 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 GAGE4Q13068 117 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 GAGE5Q13069 117 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
NUP58-207ENST00000465068 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 GTSF1LQ9H1H1 148 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
NUP58-207ENST00000465068 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
NUP58-207ENST00000465068 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
NUP58-207ENST00000465068 RNF185Q96GF1 192 aa9.28□□□□□ -0.92
NUP58-207ENST00000465068 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms