RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 RAB4BP61018 213 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 K7EQD1 137 aa7.46□□□□□ -1.21
UBR4-208ENST00000459947 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.21
UBR4-208ENST00000459947 FRZBQ92765 325 aa7.46□□□□□ -1.21
UBR4-208ENST00000459947 M0R381 172 aa7.46□□□□□ -1.22
UBR4-208ENST00000459947 GYPEP15421 78 aa7.46□□□□□ -1.22
UBR4-208ENST00000459947 ERVFC1-1P60608 527 aa7.46□□□□□ -1.22
UBR4-208ENST00000459947 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
UBR4-208ENST00000459947 A0A096LPF7 62 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 PPP1R2P9O14990 202 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 PKIAP61925 76 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 G0S2P27469 103 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 MUC4Q99102 2169 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
UBR4-208ENST00000459947 RPL19P84098 196 aaKnown RBP7.45□□□□□ -1.22
UBR4-208ENST00000459947 A0A087WWC5 75 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 RPL36AP83881 106 aaKnown RBP7.44□□□□□ -1.22
UBR4-208ENST00000459947 RPL36ALQ969Q0 106 aaKnown RBP7.44□□□□□ -1.22
UBR4-208ENST00000459947 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
UBR4-208ENST00000459947 TRAV8-6A0A0B4J262 113 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 A0A1B0GW15 77 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 S100A8P05109 93 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 TSKUQ8WUA8 353 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 K7EN84 100 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
UBR4-208ENST00000459947 OR10AG1Q8NH19 301 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 DPH3P1Q9H4G8 78 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 ADIRFQ15847 76 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 SLC25A29Q8N8R3 303 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
UBR4-208ENST00000459947 DNAH7Q8WXX0 4024 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 ZNF56Q15929 161 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 CRYGDP07320 174 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
UBR4-208ENST00000459947 RIGQ13278 110 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 LINC00336Q6ZUF6 198 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 TPPP3Q9BW30 176 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 PRSS47A8MTI9 375 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 C10orf126Q8N4M7 172 aa7.42□□□□□ -1.22
UBR4-208ENST00000459947 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
UBR4-208ENST00000459947 PCP4P48539 62 aa7.41□□□□□ -1.22
UBR4-208ENST00000459947 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
UBR4-208ENST00000459947 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
UBR4-208ENST00000459947 LELP1Q5T871 98 aa7.41□□□□□ -1.22
UBR4-208ENST00000459947 LYPD5Q6UWN5 251 aa7.41□□□□□ -1.22
UBR4-208ENST00000459947 F5H697 171 aa7.4□□□□□ -1.22
UBR4-208ENST00000459947 ESRGQ1W209 222 aa7.4□□□□□ -1.22
UBR4-208ENST00000459947 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
UBR4-208ENST00000459947 NAT8BQ9UHF3 227 aa7.4□□□□□ -1.22
UBR4-208ENST00000459947 SIVA1O15304 175 aa7.4□□□□□ -1.22
UBR4-208ENST00000459947 A0A1B0GUT8 65 aa7.4□□□□□ -1.23
UBR4-208ENST00000459947 MT-ND4LP03901 98 aa7.4□□□□□ -1.23
UBR4-208ENST00000459947 LINC00694P0DN24 101 aa7.4□□□□□ -1.23
UBR4-208ENST00000459947 ZNF575Q86XF7 245 aa7.4□□□□□ -1.23
UBR4-208ENST00000459947 NBDYA0A0U1RRE5 68 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 TWIST1Q15672 202 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 NFE4Q86UQ8 179 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 CHCHD7Q9BUK0 85 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 A0A087WWL8 130 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 PPP1R17O96001 155 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 EVI2AP22794 236 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 Q9H8V8 135 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 GZMBP10144 247 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 IFITM2Q01629 132 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 KCNIP4Q6PIL6 250 aa7.39□□□□□ -1.23
UBR4-208ENST00000459947 DYNC2H1Q8NCM8 4307 aaKnown RBP7.39□□□□□ -1.23
UBR4-208ENST00000459947 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
UBR4-208ENST00000459947 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
UBR4-208ENST00000459947 MGPP08493 103 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 ELOBQ15370 118 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
UBR4-208ENST00000459947 SAMD10Q9BYL1 202 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 KIF25-AS1Q9Y6Z4 181 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 V9GYV3 84 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 LINC00862A6NCI5 91 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 NTF3P20783 257 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 GAGE1Q13065 139 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 GAGE4Q13068 117 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 GAGE5Q13069 117 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 Q6ZR54 194 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
UBR4-208ENST00000459947 JPT2Q9H910 190 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms