RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 Q6ZSN1 163 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 CRYGDP07320 174 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 UFSP1Q6NVU6 142 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 SPATA12Q7Z6I5 190 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 SAMD10Q9BYL1 202 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 JPT2Q9H910 190 aa10.93□□□□□ -0.66
COL7A1-203ENST00000459756 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 RAB14P61106 215 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 OR10J3Q5JRS4 329 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 LELP1Q5T871 98 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 ZFP82Q8N141 532 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 SFRP2Q96HF1 295 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 TNFRSF18Q9Y5U5 241 aa10.92□□□□□ -0.66
COL7A1-203ENST00000459756 M0R381 172 aa10.91□□□□□ -0.66
COL7A1-203ENST00000459756 CXCL1P09341 107 aa10.91□□□□□ -0.66
COL7A1-203ENST00000459756 LINC01556Q5JQF7 62 aa10.91□□□□□ -0.66
COL7A1-203ENST00000459756 TRBV20OR9-2A0A075B6H5 130 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 EREGO14944 169 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 LINC00694P0DN24 101 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.66
COL7A1-203ENST00000459756 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 KRTAP17-1Q9BYP8 105 aa10.9□□□□□ -0.66
COL7A1-203ENST00000459756 GAGE12JA6NER3 117 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 TMEM250H0YL14 139 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 IGLV2-8P01709 118 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 IFITM2Q01629 132 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 GAGE1Q13065 139 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 GAGE4Q13068 117 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 GAGE5Q13069 117 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
COL7A1-203ENST00000459756 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
COL7A1-203ENST00000459756 A0A087WWL8 130 aa10.88□□□□□ -0.67
COL7A1-203ENST00000459756 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
COL7A1-203ENST00000459756 SRP19P09132 144 aaKnown RBP10.88□□□□□ -0.67
COL7A1-203ENST00000459756 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
COL7A1-203ENST00000459756 LRP1BQ9NZR2 4599 aa10.88□□□□□ -0.67
COL7A1-203ENST00000459756 RYR1P21817 5038 aa10.87□□□□□ -0.67
COL7A1-203ENST00000459756 A0A087WWC5 75 aa10.87□□□□□ -0.67
COL7A1-203ENST00000459756 IBA57-AS1B1ANH7 110 aa10.87□□□□□ -0.67
COL7A1-203ENST00000459756 DAZAP1Q96EP5 407 aaKnown RBP10.87□□□□□ -0.67
COL7A1-203ENST00000459756 Q9UF83 564 aa10.87□□□□□ -0.67
COL7A1-203ENST00000459756 PCLOQ9Y6V0 5065 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 TRBV10-1A0A0K0K1A3 114 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 SNAI2O43623 268 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 PEA15Q15121 130 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 OR10AG1Q8NH19 301 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 SMIM12Q96EX1 92 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 SMIM7Q9BQ49 75 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
COL7A1-203ENST00000459756 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
COL7A1-203ENST00000459756 A0A087WTM6 91 aa10.85□□□□□ -0.67
COL7A1-203ENST00000459756 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
COL7A1-203ENST00000459756 C9JQL5 133 aa10.85□□□□□ -0.67
COL7A1-203ENST00000459756 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
COL7A1-203ENST00000459756 HSPG2P98160 4391 aa10.85□□□□□ -0.67
COL7A1-203ENST00000459756 K7EN84 100 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 IGHV3-30P01768 117 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 IGHV3-33P01772 117 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 IGHV3-30-3P0DP02 117 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 IGHV3-30-5P0DP03 117 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 RAB4BP61018 213 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 CDPF1Q6NVV7 123 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 OR2D3Q8NGH3 330 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 BIN3Q9NQY0 253 aa10.84□□□□□ -0.67
COL7A1-203ENST00000459756 P01737 135 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 GZMBP10144 247 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 SSTP61278 116 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 LAGE3Q14657 143 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 SPANXN1Q5VSR9 72 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 TPPP3Q9BW30 176 aa10.83□□□□□ -0.68
COL7A1-203ENST00000459756 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
COL7A1-203ENST00000459756 DNAH5Q8TE73 4624 aa10.82□□□□□ -0.68
COL7A1-203ENST00000459756 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
COL7A1-203ENST00000459756 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
COL7A1-203ENST00000459756 C19orf71A6NCJ1 209 aa10.82□□□□□ -0.68
COL7A1-203ENST00000459756 PSCAO43653 123 aa10.82□□□□□ -0.68
COL7A1-203ENST00000459756 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
COL7A1-203ENST00000459756 RPL36AP83881 106 aaKnown RBP10.82□□□□□ -0.68
COL7A1-203ENST00000459756 RPL36ALQ969Q0 106 aaKnown RBP10.82□□□□□ -0.68
COL7A1-203ENST00000459756 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 ZNF56Q15929 161 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 NUDT10Q8NFP7 164 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 OR10G8Q8NGN5 311 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 NUDT11Q96G61 164 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 Q9HAA7 133 aa10.81□□□□□ -0.68
COL7A1-203ENST00000459756 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
COL7A1-203ENST00000459756 UBE2D3P61077 147 aa10.8□□□□□ -0.68
COL7A1-203ENST00000459756 UBE2D2P62837 147 aa10.8□□□□□ -0.68
COL7A1-203ENST00000459756 AP1S3Q96PC3 154 aa10.8□□□□□ -0.68
COL7A1-203ENST00000459756 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms