RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 FAM223AQ8IWN6 122 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 MAP1BP46821 2468 aaKnown RBP10.31□□□□□ -0.76
PTPRE-204ENST00000455661 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-204ENST00000455661 APC2O95996 2303 aa10.3□□□□□ -0.76
PTPRE-204ENST00000455661 SOCS3O14543 225 aa10.3□□□□□ -0.76
PTPRE-204ENST00000455661 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
PTPRE-204ENST00000455661 DEFB1P60022 68 aa10.3□□□□□ -0.76
PTPRE-204ENST00000455661 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
PTPRE-204ENST00000455661 Q8N1Y9 231 aa10.3□□□□□ -0.76
PTPRE-204ENST00000455661 GRNP28799 593 aaKnown RBP10.29□□□□□ -0.76
PTPRE-204ENST00000455661 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 TRAV8-4A0A0B4J246 113 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 TRBV27A0A0K0K1C4 114 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 F6UB75 175 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 NDUFA4O00483 81 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 IFITM1P13164 125 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 SAA4P35542 130 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 LINC01620Q4KN68 170 aa10.29□□□□□ -0.76
PTPRE-204ENST00000455661 A0A087WWL8 130 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 IGHV1-69P01742 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-204ENST00000455661 JPT2Q9H910 190 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE7O76087 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE12FP0CL80 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE12GP0CL81 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE12IP0CL82 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 GAGE4Q13068 117 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 Q6Q795 121 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
PTPRE-204ENST00000455661 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-204ENST00000455661 CSMD1Q96PZ7 3565 aa10.27□□□□□ -0.76
PTPRE-204ENST00000455661 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
PTPRE-204ENST00000455661 TCF15Q12870 199 aa10.27□□□□□ -0.77
PTPRE-204ENST00000455661 FBXL19-AS1Q494R0 122 aa10.27□□□□□ -0.77
PTPRE-204ENST00000455661 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
PTPRE-204ENST00000455661 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
PTPRE-204ENST00000455661 MGAQ8IWI9 3026 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 TRBV10-2A0A0K0K1G8 114 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 LGALS9O00182 355 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 RHOHQ15669 191 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 C11orf71Q6IPW1 123 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 LINC01600Q96MT4 127 aa10.26□□□□□ -0.77
PTPRE-204ENST00000455661 IGKV3-7A0A075B6H7 116 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 A0A0J9YX75 114 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 TRBV30A0A0K0K1B3 111 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 M0R2P5 195 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 CRLF1O75462 422 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 IGHV3-64A0A075B6Q5 118 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 H3BMM0 161 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 NSUN5P1Q3KNT7 163 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 FAM74A4Q5TZK3 123 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 UBE2WQ96B02 151 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 BEX4Q9NWD9 120 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-204ENST00000455661 LINC00527Q9UJ94 153 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 MUC4Q99102 2169 aa10.25□□□□□ -0.77
PTPRE-204ENST00000455661 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-204ENST00000455661 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 ABCA4P78363 2273 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 TEX49A0A1B0GTD5 131 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 KLLNB2CW77 178 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 TRBV12-3P01733 135 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 ZNF56Q15929 161 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-204ENST00000455661 MDFICQ9P1T7 246 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 MOB4Q9Y3A3 225 aa10.24□□□□□ -0.77
PTPRE-204ENST00000455661 NPFFO15130 113 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 TMEM219Q86XT9 240 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 ELANEP08246 267 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
PTPRE-204ENST00000455661 TRIAP1O43715 76 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 COX6CP09669 75 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 RHPN1-AS1Q9BWJ2 59 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 EP300Q09472 2414 aaPredicted RBP10.22□□□□□ -0.77
PTPRE-204ENST00000455661 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 LAMA5O15230 3695 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 ID1P41134 155 aa10.22□□□□□ -0.77
PTPRE-204ENST00000455661 A0A0J9YXV3 536 aa10.21□□□□□ -0.77
PTPRE-204ENST00000455661 M0QY20 66 aa10.21□□□□□ -0.77
PTPRE-204ENST00000455661 CCL21O00585 134 aa10.21□□□□□ -0.77
PTPRE-204ENST00000455661 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
PTPRE-204ENST00000455661 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
PTPRE-204ENST00000455661 USMG5Q96IX5 58 aa10.21□□□□□ -0.77
PTPRE-204ENST00000455661 PRSS2P07478 247 aa10.21□□□□□ -0.78
PTPRE-204ENST00000455661 PIEZO2Q9H5I5 2752 aa10.2□□□□□ -0.78
PTPRE-204ENST00000455661 I3L3M4 83 aa10.2□□□□□ -0.78
PTPRE-204ENST00000455661 ICOSQ9Y6W8 199 aa10.2□□□□□ -0.78
PTPRE-204ENST00000455661 BSNQ9UPA5 3926 aa10.2□□□□□ -0.78
PTPRE-204ENST00000455661 ACACAQ13085 2346 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms