RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 TRBV6-5A0A0K0K1A5 114 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 TRBV7-7A0A0K0K1E9 115 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 TCRBV4S1A1TA0A5B7 111 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 GNGT2O14610 69 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 CCKP06307 115 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 CXCL8P10145 99 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 SNCAP37840 140 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 ELOBQ15370 118 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 RHOHQ15669 191 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 Q1T7F1 81 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 C2orf82Q6UX34 121 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 Q6ZSA8 131 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 ZNF833PQ6ZTB9 187 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 C15orf53Q8NAA6 179 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 Q8TAT8 98 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 C10orf82Q8WW14 230 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 PPDPFLQ8WWR9 84 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 CITO14578 2027 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 PLXNA2O75051 1894 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 TRIOBPQ9H2D6 2365 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 ADAMTS12P58397 1594 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 TET3O43151 1660 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 COL4A5P29400 1685 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 DOCK1Q14185 1865 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 F8W1H4 67 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 GYPAP02724 150 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 PRB1P04280 392 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 CBLN1P23435 193 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 MIR22HGQ0VDD5 57 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 PEA15Q15121 130 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 SLC48A1Q6P1K1 146 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 UNQ5815/PRO19632Q6UWF5 114 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.42□□□□□ -2.18
TRGVB-201ENST00000453257 PMCHL2Q9BQD1 86 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 MRPL35Q9NZE8 188 aaKnown RBP1.42□□□□□ -2.18
TRGVB-201ENST00000453257 TNS1Q9HBL0 1735 aaKnown RBP1.42□□□□□ -2.18
TRGVB-201ENST00000453257 SHANK2Q9UPX8 1470 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 DIP2BQ9P265 1576 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 RGPD4Q7Z3J3 1758 aa1.42□□□□□ -2.18
TRGVB-201ENST00000453257 ANK1P16157 1881 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 DOCK10Q96BY6 2186 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 KDM6BO15054 1643 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 COL11A1P12107 1806 aaPredicted RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 PSME4Q14997 1843 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 hADV29S1A0JD25 119 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 C2orf70A6NJV1 201 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 ATOX1O00244 68 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 NUPR1O60356 82 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 MRPS14O60783 128 aaKnown RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 IGKCP01834 107 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 NMBP08949 121 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 TRAPPC2P0DI81 140 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 TRAPPC2BP0DI82 140 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 SLC25A6P12236 298 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 POLR2JP52435 117 aaKnown RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 RBM3P98179 157 aaKnown RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 PDE6HQ13956 83 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 C9orf116Q5BN46 136 aaPredicted RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 S100A7L2Q5SY68 101 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 MYOZ3Q8TDC0 251 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 TSLPQ969D9 159 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 LINC00052Q96N35 136 aa1.41□□□□□ -2.18
TRGVB-201ENST00000453257 POLA1P09884 1462 aaPredicted RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 MUC22E2RYF6 1773 aaPredicted RBP1.41□□□□□ -2.18
TRGVB-201ENST00000453257 CLIP1P30622 1438 aa1.4□□□□□ -2.18
TRGVB-201ENST00000453257 MAP3K4Q9Y6R4 1608 aa1.4□□□□□ -2.18
TRGVB-201ENST00000453257 MYH8P13535 1937 aa1.4□□□□□ -2.18
TRGVB-201ENST00000453257 THOC2Q8NI27 1593 aaKnown RBP1.4□□□□□ -2.19
TRGVB-201ENST00000453257 GOLGA3Q08378 1498 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 TRAV17A0A0B4J275 112 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 TRBV10-3A0A0K0K1G6 114 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 CXorf51AA0A1B0GTR3 108 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 SFT2D2O95562 160 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 CYB5AP00167 134 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 KRTDAPP60985 99 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 UBE2G1P62253 170 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 KRTAP21-3Q3LHN1 58 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 TDRG1Q3Y452 100 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 ZNF720Q7Z2F6 126 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 ZNF431Q8TF32 576 aaPredicted RBP1.4□□□□□ -2.19
TRGVB-201ENST00000453257 S100A13Q99584 98 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 PTPRFP10586 1907 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 NWD2Q9ULI1 1742 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 KIF14Q15058 1648 aa1.4□□□□□ -2.19
TRGVB-201ENST00000453257 EPRSP07814 1512 aaKnown RBP1.4□□□□□ -2.19
TRGVB-201ENST00000453257 EML5Q05BV3 1969 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 TRPM7Q96QT4 1865 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 PLXNA4Q9HCM2 1894 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 LAMB4A4D0S4 1761 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 RGPD3A6NKT7 1758 aaPredicted RBP1.39□□□□□ -2.19
TRGVB-201ENST00000453257 FANCAO15360 1455 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 PATJQ8NI35 1801 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 NAP1L6A6NFF2 107 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 IGHV3-33P01772 117 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 CNBPP62633 177 aaKnown RBP1.39□□□□□ -2.19
TRGVB-201ENST00000453257 CCL8P80075 99 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 C1orf137Q5JT78 98 aa1.39□□□□□ -2.19
TRGVB-201ENST00000453257 RPL7L1Q6DKI1 246 aaKnown RBP1.39□□□□□ -2.19
TRGVB-201ENST00000453257 NDUFA11Q86Y39 141 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms