RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TRAV26-2A0A0B4J265 109 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 H0Y8G0 127 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 M0R381 172 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 NXPH4O95158 308 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 NPSP0C0P6 89 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 LEPP41159 167 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 Q6ZN92 141 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 Q8N8P6 123 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 C4orf3Q8WVX3 66 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 RAX2Q96IS3 184 aa7.95□□□□□ -1.14
PKP4-206ENST00000452162 C7orf71A4D174 169 aa7.94□□□□□ -1.14
PKP4-206ENST00000452162 LINC01619G3V211 115 aa7.94□□□□□ -1.14
PKP4-206ENST00000452162 CDKN1BP46527 198 aa7.94□□□□□ -1.14
PKP4-206ENST00000452162 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
PKP4-206ENST00000452162 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 PF4P02776 101 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 FCER1GP30273 86 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
PKP4-206ENST00000452162 ODF1Q14990 250 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 CCL24O00175 119 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 TSPOP30536 169 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 LGALS9BQ3B8N2 356 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 LGALS9CQ6DKI2 356 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 OR11H1Q8NG94 326 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 IFI27L1Q96BM0 104 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 TMEM208Q9BTX3 173 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
PKP4-206ENST00000452162 TRAV12-3A0A0B4J271 114 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 FAM159AQ6UWV7 190 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 FBN3Q75N90 2809 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 DUSP14O95147 198 aaKnown RBP7.92□□□□□ -1.14
PKP4-206ENST00000452162 FOXI2Q6ZQN5 318 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 OR1N2Q8NGR9 330 aa7.92□□□□□ -1.14
PKP4-206ENST00000452162 MRPS16Q9Y3D3 137 aaKnown RBP7.92□□□□□ -1.14
PKP4-206ENST00000452162 AMTNQ6UX39 209 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 C14orf178Q8N769 122 aaPredicted RBP7.91□□□□□ -1.14
PKP4-206ENST00000452162 POM121L12Q8N7R1 296 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 OR9G4Q8NGQ1 327 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 AP1S3Q96PC3 154 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 TRAV2A0A0B4J234 112 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 IGKV3-20P01619 116 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 FHL3Q13643 280 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 RASL10AQ92737 203 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 DPF1Q92782 380 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 PEMTQ9UBM1 199 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 KIF25-AS1Q9Y6Z4 181 aa7.91□□□□□ -1.14
PKP4-206ENST00000452162 TRAV12-2A0A075B6T6 113 aa7.9□□□□□ -1.14
PKP4-206ENST00000452162 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
PKP4-206ENST00000452162 RNASE8Q8TDE3 154 aaKnown RBP7.9□□□□□ -1.14
PKP4-206ENST00000452162 DLX4Q92988 240 aaPredicted RBP7.9□□□□□ -1.14
PKP4-206ENST00000452162 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.14
PKP4-206ENST00000452162 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
PKP4-206ENST00000452162 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 A8MTW9 85 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 CD7P09564 240 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 LINC00315P59091 139 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 SPINK13Q1W4C9 94 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 C9orf85Q96MD7 179 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 MUC4Q99102 2169 aa7.9□□□□□ -1.15
PKP4-206ENST00000452162 MGPP08493 103 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 LAGE3Q14657 143 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 C18orf15Q96N68 181 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 BATFQ16520 125 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 OXLD1Q5BKU9 147 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 TMEM61Q8N0U2 210 aa7.89□□□□□ -1.15
PKP4-206ENST00000452162 RPL39LQ96EH5 51 aaKnown RBP7.89□□□□□ -1.15
PKP4-206ENST00000452162 IGHV1OR15-1A0A075B7D0 117 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 G3V4G9 280 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 SUMO2P61956 95 aaKnown RBP7.88□□□□□ -1.15
PKP4-206ENST00000452162 SLC25A34Q6PIV7 304 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 KNCNA6PVL3 124 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 DEFB131AP59861 70 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 Q8N1Y9 231 aa7.88□□□□□ -1.15
PKP4-206ENST00000452162 COX8AP10176 69 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 HLA-DRB4P13762 266 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 DEFB114Q30KQ6 69 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 JPT2Q9H910 190 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 MDFICQ9P1T7 246 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 DKK2Q9UBU2 259 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 HLA-DRB4X5D2U9 266 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 AGRNO00468 2067 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 SORL1Q92673 2214 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 DNAH3Q8TD57 4116 aa7.87□□□□□ -1.15
PKP4-206ENST00000452162 ATP5LO75964 103 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 PPP1R17O96001 155 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 STPG4Q8N801 248 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 ZMAT4Q9H898 229 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 RBMY1BA6NDE4 496 aaKnown RBP7.86□□□□□ -1.15
PKP4-206ENST00000452162 RBMY1EA6NEQ0 496 aaKnown RBP7.86□□□□□ -1.15
PKP4-206ENST00000452162 H3BMM0 161 aa7.86□□□□□ -1.15
PKP4-206ENST00000452162 RBMY1DP0C7P1 496 aaKnown RBP7.86□□□□□ -1.15
PKP4-206ENST00000452162 RBMY1A1P0DJD3 496 aaKnown RBP7.86□□□□□ -1.15
PKP4-206ENST00000452162 RBMY1CP0DJD4 496 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms