RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
CPSF7-207ENST00000449811 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.02
CPSF7-207ENST00000449811 FLI1Q01543 452 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-207ENST00000449811 C5orf17Q8NAS9 161 aa8.65□□□□□ -1.02
CPSF7-207ENST00000449811 SPACA4Q8TDM5 124 aa8.65□□□□□ -1.02
CPSF7-207ENST00000449811 TRBV7-3A0A075B6L6 115 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 IGHV3-64A0A075B6Q5 118 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 CCDC160A6NGH7 325 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 PLA2G10O15496 165 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 LYRM1O43325 122 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 OR11H4Q8NGC9 324 aa8.64□□□□□ -1.03
CPSF7-207ENST00000449811 HMGB3O15347 200 aaKnown RBP8.63□□□□□ -1.03
CPSF7-207ENST00000449811 KRTAP10-8P60410 259 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 PKIAP61925 76 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 SCGB1C1Q8TD33 95 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
CPSF7-207ENST00000449811 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CPSF7-207ENST00000449811 H0YIZ8 118 aa8.62□□□□□ -1.03
CPSF7-207ENST00000449811 PTTG1O95997 202 aa8.62□□□□□ -1.03
CPSF7-207ENST00000449811 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
CPSF7-207ENST00000449811 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
CPSF7-207ENST00000449811 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-207ENST00000449811 FABP5P3A8MUU1 101 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 B4DEV8 164 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 ARMS2P0C7Q2 107 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 ARL14EPLP0DKL9 152 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
CPSF7-207ENST00000449811 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 OR10G8Q8NGN5 311 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CPSF7-207ENST00000449811 SIX6O95475 246 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 RAB2AP61019 212 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 GTSF1Q8WW33 167 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 SMIM3Q9BZL3 60 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 RBM38Q9H0Z9 239 aaKnown RBP8.6□□□□□ -1.03
CPSF7-207ENST00000449811 EPDR1Q9UM22 224 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
CPSF7-207ENST00000449811 M0R381 172 aa8.59□□□□□ -1.03
CPSF7-207ENST00000449811 SLPIP03973 132 aa8.59□□□□□ -1.03
CPSF7-207ENST00000449811 RBX1P62877 108 aa8.59□□□□□ -1.03
CPSF7-207ENST00000449811 SUMO1P63165 101 aaKnown RBP8.59□□□□□ -1.03
CPSF7-207ENST00000449811 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
CPSF7-207ENST00000449811 ARL2-SNX15V9GYD0 113 aa8.59□□□□□ -1.03
CPSF7-207ENST00000449811 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 IGLV10-54A0A075B6I4 117 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 GRIFINA4D1Z8 144 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 M0R036 132 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-207ENST00000449811 NEXN-AS1Q8NBZ9 246 aa8.58□□□□□ -1.04
CPSF7-207ENST00000449811 TRAV34A0A0B4J273 112 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 STAG3L2P0CL84 134 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 STAG3L3P0CL85 134 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 TPT1P13693 172 aaKnown RBP8.57□□□□□ -1.04
CPSF7-207ENST00000449811 GCHFRP30047 84 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 CDC34P49427 236 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-207ENST00000449811 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 ZFP82Q8N141 532 aa8.57□□□□□ -1.04
CPSF7-207ENST00000449811 RAB4BP61018 213 aa8.56□□□□□ -1.04
CPSF7-207ENST00000449811 REG3AQ06141 175 aa8.56□□□□□ -1.04
CPSF7-207ENST00000449811 GAGE6Q13070 117 aa8.56□□□□□ -1.04
CPSF7-207ENST00000449811 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
CPSF7-207ENST00000449811 SUN5Q8TC36 379 aa8.56□□□□□ -1.04
CPSF7-207ENST00000449811 CYCSP99999 105 aaKnown RBP8.55□□□□□ -1.04
CPSF7-207ENST00000449811 COX6A2Q02221 97 aa8.55□□□□□ -1.04
CPSF7-207ENST00000449811 ZNF56Q15929 161 aa8.55□□□□□ -1.04
CPSF7-207ENST00000449811 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
CPSF7-207ENST00000449811 TMEM97Q5BJF2 176 aa8.55□□□□□ -1.04
CPSF7-207ENST00000449811 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
CPSF7-207ENST00000449811 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 RPL12P30050 165 aaKnown RBP8.54□□□□□ -1.04
CPSF7-207ENST00000449811 CRIP1P50238 77 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 Q86TA4 180 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 PPP1R1CQ8WVI7 109 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 RAB24Q969Q5 203 aa8.54□□□□□ -1.04
CPSF7-207ENST00000449811 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 TMSB15BA0A087X1C1 80 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 TRAV8-4A0A0B4J246 113 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 SH2D1AO60880 128 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 P01737 135 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 STPG4Q8N801 248 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 DERL1Q9BUN8 251 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
CPSF7-207ENST00000449811 TRBV6-1A0A0K0K1D8 114 aa8.52□□□□□ -1.05
CPSF7-207ENST00000449811 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
CPSF7-207ENST00000449811 PET100P0DJ07 73 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms