RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 VSIG2Q96IQ7 327 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 LITAFQ99732 161 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 IGHV7-4-1A0A0J9YVY3 117 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
LINC00342-202ENST00000448494 IGKV3D-20A0A0C4DH25 116 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 COX7A2LO14548 114 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 IGLV2-23P01705 113 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 XCL1P47992 114 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 XCL2Q9UBD3 114 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 SRRM5B3KS81 715 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 H7BZZ5 65 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 IGKV1-17P01599 117 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 SPANXN1Q5VSR9 72 aa8.05□□□□□ -1.12
LINC00342-202ENST00000448494 CFAP54Q96N23 3096 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 IGHV3-21A0A0B4J1V1 117 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 IGKV3D-7A0A0C4DH55 119 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 ZNF561-AS1K7EIQ3 104 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 MIAQ16674 131 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 CNTRLQ7Z7A1 2325 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 IGHV1OR21-1A0A087WYE8 117 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 NTN3O00634 580 aaPredicted RBP8.04□□□□□ -1.12
LINC00342-202ENST00000448494 CFHR1Q03591 330 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 CD164Q04900 197 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 PCOLCEQ15113 449 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 ZNRF1Q8ND25 227 aa8.04□□□□□ -1.12
LINC00342-202ENST00000448494 RNASE6Q93091 150 aaKnown RBP8.04□□□□□ -1.12
LINC00342-202ENST00000448494 A0A087WVE0 104 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 GHRHP01286 108 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 BEAN1Q3B7T3 259 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 TMEM105Q8N8V8 129 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 IMMP1LQ96LU5 166 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
LINC00342-202ENST00000448494 TRIOO75962 3097 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 DNAL4O96015 105 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 C22orf24Q9Y442 160 aa8.03□□□□□ -1.12
LINC00342-202ENST00000448494 CACNA1HO95180 2353 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 C5orf42Q9H799 3197 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 IGHV1OR15-9A0A0B4J2B8 117 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 TMEM89A2RUT3 159 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 I3L2K1 104 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 M0R1W7 72 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 RPL27AP46776 148 aaKnown RBP8.02□□□□□ -1.13
LINC00342-202ENST00000448494 C20orf197Q8N268 126 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 SPTBN4Q9H254 2564 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 BCE1O60756 84 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
LINC00342-202ENST00000448494 MRGPRG-AS1Q2M3A8 158 aa8.02□□□□□ -1.13
LINC00342-202ENST00000448494 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
LINC00342-202ENST00000448494 DSCAMO60469 2012 aa8.01□□□□□ -1.13
LINC00342-202ENST00000448494 RFPL3SP0C7P2 107 aa8.01□□□□□ -1.13
LINC00342-202ENST00000448494 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
LINC00342-202ENST00000448494 LAMTOR3Q9UHA4 124 aa8.01□□□□□ -1.13
LINC00342-202ENST00000448494 IGHV1-69P01742 117 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 CFHR3Q02985 330 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 RETNQ9HD89 108 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 Q6ZSV7 163 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 PRR15Q8IV56 129 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 FAM186AA6NE01 2351 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 SVILO95425 2214 aa8□□□□□ -1.13
LINC00342-202ENST00000448494 CCKP06307 115 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 MAGEA5P43359 124 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 C11orf21Q9P2W6 132 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 FREM1Q5H8C1 2179 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 DNAH14Q0VDD8 3507 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 NAV3Q8IVL0 2385 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 TRAV12-3A0A0B4J271 114 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.99□□□□□ -1.13
LINC00342-202ENST00000448494 TIMM17BO60830 172 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 KLKP1Q107X0 134 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 Q6ZRU5 148 aa7.99□□□□□ -1.13
LINC00342-202ENST00000448494 PTPRZ1P23471 2315 aaPredicted RBP7.99□□□□□ -1.13
LINC00342-202ENST00000448494 TRBV7-6A0A0J9YX20 115 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 RAI1Q7Z5J4 1906 aaPredicted RBP7.98□□□□□ -1.13
LINC00342-202ENST00000448494 LMO7DNF2Z398 122 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
LINC00342-202ENST00000448494 GPHB5Q86YW7 130 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
LINC00342-202ENST00000448494 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
LINC00342-202ENST00000448494 S100A7L2Q5SY68 101 aa7.97□□□□□ -1.13
LINC00342-202ENST00000448494 IGFL2Q6UWQ7 119 aa7.97□□□□□ -1.13
LINC00342-202ENST00000448494 Q96MF0 132 aa7.97□□□□□ -1.13
LINC00342-202ENST00000448494 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
LINC00342-202ENST00000448494 LINC00474Q9P2X8 69 aa7.97□□□□□ -1.13
LINC00342-202ENST00000448494 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.14
LINC00342-202ENST00000448494 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 A0A087WW49 117 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 TEX22C9J3V5 150 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 VCYO14598 125 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 NDUFC1O43677 76 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 RPL39P62891 51 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms