RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GRIFINA4D1Z8 144 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GAGE12JA6NER3 117 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 M0R036 132 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 BCL2L11O43521 198 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 PFDN1O60925 122 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 XGP55808 180 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GAGE1Q13065 139 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GAGE4Q13068 117 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GAGE5Q13069 117 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 GAGE13Q4V321 117 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
HMGB2-203ENST00000446922 SAMD10Q9BYL1 202 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 JPT2Q9H910 190 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 COX11Q9Y6N1 276 aa10.41□□□□□ -0.74
HMGB2-203ENST00000446922 SMLR1H3BR10 107 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 H2AFB1P0C5Y9 115 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.74
HMGB2-203ENST00000446922 EPM2AB3EWF7 344 aa10.39□□□□□ -0.75
HMGB2-203ENST00000446922 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
HMGB2-203ENST00000446922 C14orf178Q8N769 122 aaPredicted RBP10.39□□□□□ -0.75
HMGB2-203ENST00000446922 TMEM70Q9BUB7 260 aa10.39□□□□□ -0.75
HMGB2-203ENST00000446922 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
HMGB2-203ENST00000446922 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 C1QBP02746 253 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 RAB5CP51148 216 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 BAGE2Q86Y30 109 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 Q8N814 137 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
HMGB2-203ENST00000446922 Q9HAA7 133 aa10.38□□□□□ -0.75
HMGB2-203ENST00000446922 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 M0R381 172 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.758e-10■■■■■ 28.6
HMGB2-203ENST00000446922 RAB4BP61018 213 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 RPL36AP83881 106 aaKnown RBP10.37□□□□□ -0.75
HMGB2-203ENST00000446922 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
HMGB2-203ENST00000446922 RPL36ALQ969Q0 106 aaKnown RBP10.37□□□□□ -0.75
HMGB2-203ENST00000446922 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 Q9UF83 564 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
HMGB2-203ENST00000446922 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 SCO2A0A1W2PP80 73 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 TEX46H3BTG2 121 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 SNAI2O43623 268 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 OR5AL1P0C617 328 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 ELOBQ15370 118 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 RMI2Q96E14 147 aa10.36□□□□□ -0.75
HMGB2-203ENST00000446922 A0A087WWL8 130 aa10.35□□□□□ -0.75
HMGB2-203ENST00000446922 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
HMGB2-203ENST00000446922 NIT1Q86X76 327 aa10.35□□□□□ -0.75
HMGB2-203ENST00000446922 FRZBQ92765 325 aa10.35□□□□□ -0.75
HMGB2-203ENST00000446922 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
HMGB2-203ENST00000446922 UBE2D3P61077 147 aa10.34□□□□□ -0.75
HMGB2-203ENST00000446922 UBE2D2P62837 147 aa10.34□□□□□ -0.75
HMGB2-203ENST00000446922 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
HMGB2-203ENST00000446922 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
HMGB2-203ENST00000446922 SMIM12Q96EX1 92 aa10.34□□□□□ -0.75
HMGB2-203ENST00000446922 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
HMGB2-203ENST00000446922 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
HMGB2-203ENST00000446922 A0A087WX48 190 aa10.32□□□□□ -0.76
HMGB2-203ENST00000446922 A6NJY4 79 aa10.32□□□□□ -0.76
HMGB2-203ENST00000446922 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
HMGB2-203ENST00000446922 PKIAP61925 76 aa10.32□□□□□ -0.76
HMGB2-203ENST00000446922 TMEM97Q5BJF2 176 aa10.32□□□□□ -0.76
HMGB2-203ENST00000446922 OR10AG1Q8NH19 301 aa10.32□□□□□ -0.76
HMGB2-203ENST00000446922 A0A1B0GV50 99 aa10.31□□□□□ -0.76
HMGB2-203ENST00000446922 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
HMGB2-203ENST00000446922 RPL19P84098 196 aaKnown RBP10.31□□□□□ -0.76
HMGB2-203ENST00000446922 Q0VG73 95 aa10.31□□□□□ -0.76
HMGB2-203ENST00000446922 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
HMGB2-203ENST00000446922 Q8N3U1 123 aa10.31□□□□□ -0.76
HMGB2-203ENST00000446922 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
HMGB2-203ENST00000446922 SULT1A2P50226 295 aa10.3□□□□□ -0.76
HMGB2-203ENST00000446922 RPS20P60866 119 aaKnown RBP10.3□□□□□ -0.76
HMGB2-203ENST00000446922 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
HMGB2-203ENST00000446922 Q8N976 141 aa10.3□□□□□ -0.76
HMGB2-203ENST00000446922 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
HMGB2-203ENST00000446922 PDE6DO43924 150 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 CCL20P78556 96 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 ZNF56Q15929 161 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 Q5VSD8 79 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
HMGB2-203ENST00000446922 BIN3Q9NQY0 253 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 KLK12Q9UKR0 248 aa10.29□□□□□ -0.76
HMGB2-203ENST00000446922 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
HMGB2-203ENST00000446922 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
HMGB2-203ENST00000446922 TAGLN2P37802 199 aaKnown RBP10.28□□□□□ -0.76
HMGB2-203ENST00000446922 AP1S3Q96PC3 154 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 275 ms