RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 RHEBQ15382 184 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 IBA57Q5T440 356 aaKnown RBP6.2□□□□□ -1.42
USP6NL-203ENST00000443016 LINC01561Q8N1V8 128 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.2□□□□□ -1.42
USP6NL-203ENST00000443016 ISOC2Q96AB3 205 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 C16orf74Q96GX8 76 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
USP6NL-203ENST00000443016 TIMM8BQ9Y5J9 83 aaPredicted RBP6.2□□□□□ -1.42
USP6NL-203ENST00000443016 FABP5P3A8MUU1 101 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 F5H768 121 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 IGLV2-8P01709 118 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 P01737 135 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 MT-ND4LP03901 98 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 RNASE4P34096 147 aaKnown RBP6.19□□□□□ -1.42
USP6NL-203ENST00000443016 IGLV2-18A0A075B6J9 118 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 ATP5G1P05496 136 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 Q6AWC8 147 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 ZNF493Q6ZR52 646 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 SFRP2Q96HF1 295 aa6.19□□□□□ -1.42
USP6NL-203ENST00000443016 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
USP6NL-203ENST00000443016 SH2D1AO60880 128 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 BTN1A1Q13410 526 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 OR5I1Q13606 314 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 GFI1BQ5VTD9 330 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 C15orf53Q8NAA6 179 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 OR10G8Q8NGN5 311 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
USP6NL-203ENST00000443016 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 DNAH10Q8IVF4 4471 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 RPS20P60866 119 aaKnown RBP6.18□□□□□ -1.42
USP6NL-203ENST00000443016 VAMP3Q15836 100 aa6.18□□□□□ -1.42
USP6NL-203ENST00000443016 TRAV12-3A0A0B4J271 114 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 SNURFLB1AK76 121 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 NUDT3O95989 172 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 RNF212Q495C1 297 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 PRR9Q5T870 116 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 KCNS1Q96KK3 526 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
USP6NL-203ENST00000443016 RPP21Q9H633 154 aaKnown RBP6.17□□□□□ -1.42
USP6NL-203ENST00000443016 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 ORM1P02763 201 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 OR2D3Q8NGH3 330 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 RPS10P5Q9NQ39 176 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 HECTD4Q9Y4D8 3996 aa6.17□□□□□ -1.42
USP6NL-203ENST00000443016 RAB4AP20338 218 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
USP6NL-203ENST00000443016 COX19Q49B96 90 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
USP6NL-203ENST00000443016 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 A0A087WWC5 75 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 C7orf77A4D0Y5 90 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 A8MWL6 223 aa6.16□□□□□ -1.42
USP6NL-203ENST00000443016 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 TRIAP1O43715 76 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 CXCL1P09341 107 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 CRIP1P50238 77 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 CCL18P55774 89 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.42
USP6NL-203ENST00000443016 GAGE12BA1L429 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 GAGE7O76087 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 GAGE12FP0CL80 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 GAGE12GP0CL81 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 GAGE12IP0CL82 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 S100PP25815 95 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 GAGE13Q4V321 117 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 MUC21Q5SSG8 566 aa6.15□□□□□ -1.43
USP6NL-203ENST00000443016 DNAH2Q9P225 4427 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
USP6NL-203ENST00000443016 S100A4P26447 101 aaKnown RBP6.14□□□□□ -1.43
USP6NL-203ENST00000443016 ASIPP42127 132 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 RPL19P84098 196 aaKnown RBP6.14□□□□□ -1.43
USP6NL-203ENST00000443016 ANXA2RQ3ZCQ2 193 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 TMEM242Q9NWH2 141 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 V9GYV3 84 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 TMSB15BA0A087X1C1 80 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 TDRG1Q3Y452 100 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 BORCS7Q96B45 105 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 GFRA4Q9GZZ7 299 aa6.14□□□□□ -1.43
USP6NL-203ENST00000443016 TRGV2A0A075B6R0 118 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 FAM231BA6NCW3 169 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 OXTP01178 125 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
USP6NL-203ENST00000443016 IMMP2LQ96T52 175 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 IL36BQ9NZH7 164 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 V9GYY9 64 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 A0A0J9YY99 117 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 RTL8CO15255 209 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 C1orf134Q5TEV5 83 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 BTF3L4Q96K17 158 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 GSN-AS1Q9NRJ2 163 aa6.13□□□□□ -1.43
USP6NL-203ENST00000443016 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms