RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MUC21A0A140T8X8 626 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 BATFQ16520 125 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 LGALS9BQ3B8N2 356 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 MUC21Q5SSG8 566 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGFL4Q6B9Z1 124 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 LGALS9CQ6DKI2 356 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 B9D2Q9BPU9 175 aa5.5□□□□□ -1.53
CDC42BPA-208ENST00000442054 ZNF469Q96JG9 3925 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 ADARB2-AS1A8MUL3 147 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 CFHR3Q02985 330 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 U3KQE9 123 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 TRAV8-2A0A0B4J237 113 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 SERTM2A0A1B0GWG4 89 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 VGLL1Q99990 258 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 SLC50A1Q9BRV3 221 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 RETNQ9HD89 108 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 TRAV8-6A0A0B4J262 113 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 DAZAP1Q96EP5 407 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-208ENST00000442054 D6R8Y8 96 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 WIPF1O43516 503 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 DAD1P61803 113 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 PSG9Q00887 426 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 INSP01308 110 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 FHL3Q13643 280 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 AMN1Q8IY45 258 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 C11orf45Q8TAV5 145 aa5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 PHLDA1Q8WV24 401 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGHV4-4A0A075B6R2 117 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGLL5B9A064 214 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 HLA-DMBP28068 263 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 SPINK13Q1W4C9 94 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 C18orf15Q96N68 181 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 RBAKDNA6NC62 111 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 PRAC2D3DTV9 90 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 LY6G6CO95867 125 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 NPYP01303 97 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 RIGQ13278 110 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 SBSPONQ8IVN8 264 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 MAP1LC3CQ9BXW4 147 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 TMEM191AQ9H0A3 160 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 F5H768 121 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 SIVA1O15304 175 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 NUDT3O95989 172 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 MORN3Q6PF18 240 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 NRACQ8N912 160 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 TPPP3Q9BW30 176 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 MAP6D1Q9H9H5 199 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 MSRB1Q9NZV6 116 aa5.47□□□□□ -1.53
CDC42BPA-208ENST00000442054 BUB3O43684 328 aa5.46□□□□□ -1.53
CDC42BPA-208ENST00000442054 BRI3O95415 125 aa5.46□□□□□ -1.53
CDC42BPA-208ENST00000442054 FAM19A4Q96LR4 140 aa5.46□□□□□ -1.53
CDC42BPA-208ENST00000442054 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.53
CDC42BPA-208ENST00000442054 EDN2P20800 178 aa5.46□□□□□ -1.54
CDC42BPA-208ENST00000442054 FAM159AQ6UWV7 190 aa5.46□□□□□ -1.54
CDC42BPA-208ENST00000442054 CUBNO60494 3623 aa5.46□□□□□ -1.54
CDC42BPA-208ENST00000442054 FBLL1A6NHQ2 334 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-208ENST00000442054 F6UB75 175 aa5.46□□□□□ -1.54
CDC42BPA-208ENST00000442054 SPART-AS1P0CW21 52 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 Q6ZQT7 251 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 OR10AG1Q8NH19 301 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 HLA-DRB4P13762 266 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 RNASE4P34096 147 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 RNF182Q8N6D2 247 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 POM121L12Q8N7R1 296 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 MUC7Q8TAX7 377 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 HLA-DRB4X5D2U9 266 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 SOCS3O14543 225 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 SNAI2O43623 268 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 NACAE9PAV3 2078 aa5.45□□□□□ -1.54
CDC42BPA-208ENST00000442054 FOXI2Q6ZQN5 318 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 ORMDL3Q8N138 153 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 Q8TAT8 98 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 PRELID3AQ96N28 172 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 TRAV12-2A0A075B6T6 113 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 TRAV12-3A0A0B4J271 114 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 SMKR1H3BMG3 65 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 ORM1P02763 201 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 LEPP41159 167 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 MYOZ3Q8TDC0 251 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 A0A0J9YWU9 116 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 PRR9Q5T870 116 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 NEGR1Q7Z3B1 354 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
CDC42BPA-208ENST00000442054 TMEM189A5PLL7 270 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 H3BRM9 83 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 CST9LQ9H4G1 147 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 HBDP02042 147 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 EVI2AP22794 236 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms