RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SUMO2P61956 95 aaKnown RBP12.78□□□□□ -0.36
PMS1-213ENST00000441310 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
PMS1-213ENST00000441310 IGHV7-4-1A0A0J9YVY3 117 aa12.77□□□□□ -0.36
PMS1-213ENST00000441310 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.36
PMS1-213ENST00000441310 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
PMS1-213ENST00000441310 HERVK_113P61574 105 aa12.77□□□□□ -0.37
PMS1-213ENST00000441310 LRRK2Q5S007 2527 aa12.76□□□□□ -0.37
PMS1-213ENST00000441310 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
PMS1-213ENST00000441310 M0R381 172 aa12.76□□□□□ -0.37
PMS1-213ENST00000441310 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
PMS1-213ENST00000441310 LINC01620Q4KN68 170 aa12.76□□□□□ -0.37
PMS1-213ENST00000441310 J3KRW8 73 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 MFAP4P55083 255 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 ZNF56Q15929 161 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 SLC25A29Q8N8R3 303 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 DPM3Q9P2X0 92 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 IGHV3-66A0A0C4DH42 116 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 EIF4EBP3O60516 100 aaPredicted RBP12.75□□□□□ -0.37
PMS1-213ENST00000441310 IGHV3-33P01772 117 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
PMS1-213ENST00000441310 PRORYQ9H606 182 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 VPS13CQ709C8 3753 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 MGPP08493 103 aa12.75□□□□□ -0.37
PMS1-213ENST00000441310 IGHV3OR16-13A0A075B7E8 117 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 IGHV3-74A0A0B4J1X5 117 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 H3BMM0 161 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 ATP5J2P56134 94 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 C21orf62Q9NYP8 219 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 CRYGDP07320 174 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 ITLN2Q8WWU7 325 aaPredicted RBP12.74□□□□□ -0.37
PMS1-213ENST00000441310 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
PMS1-213ENST00000441310 LY6LH3BQJ8 138 aa12.73□□□□□ -0.37
PMS1-213ENST00000441310 EPG5Q9HCE0 2579 aa12.73□□□□□ -0.37
PMS1-213ENST00000441310 ATXN8Q156A1 80 aa12.73□□□□□ -0.37
PMS1-213ENST00000441310 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
PMS1-213ENST00000441310 ZNF462Q96JM2 2506 aa12.72□□□□□ -0.37
PMS1-213ENST00000441310 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
PMS1-213ENST00000441310 VMO1Q7Z5L0 202 aa12.72□□□□□ -0.37
PMS1-213ENST00000441310 F8W735 103 aaPredicted RBP12.72□□□□□ -0.37
PMS1-213ENST00000441310 LINC01587Q99440 93 aa12.72□□□□□ -0.37
PMS1-213ENST00000441310 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
PMS1-213ENST00000441310 LGALS9O00182 355 aa12.71□□□□□ -0.37
PMS1-213ENST00000441310 CELSR2Q9HCU4 2923 aa12.71□□□□□ -0.37
PMS1-213ENST00000441310 C2orf82Q6UX34 121 aa12.71□□□□□ -0.38
PMS1-213ENST00000441310 TMEM263Q8WUH6 116 aaKnown RBP12.71□□□□□ -0.38
PMS1-213ENST00000441310 FANCD2OSQ96PS1 177 aa12.71□□□□□ -0.38
PMS1-213ENST00000441310 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
PMS1-213ENST00000441310 BPESC1Q9GZL8 116 aa12.7□□□□□ -0.38
PMS1-213ENST00000441310 TMEM126AQ9H061 195 aa12.7□□□□□ -0.38
PMS1-213ENST00000441310 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
PMS1-213ENST00000441310 LGALS3P17931 250 aaKnown RBP12.7□□□□□ -0.38
PMS1-213ENST00000441310 IGHV3-64A0A075B6Q5 118 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 NBR2O15453 112 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 IGHV3-49A0A0A0MS15 119 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 MUSTN1Q8IVN3 82 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 TP53TG1Q9Y2A0 90 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 IGHV3OR16-10A0A075B7F0 116 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 J3QQQ9 107 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 TSHBP01222 138 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 RPL13AP40429 203 aaKnown RBP12.69□□□□□ -0.38
PMS1-213ENST00000441310 ZFHX3Q15911 3703 aa12.69□□□□□ -0.38
PMS1-213ENST00000441310 RPL39P62891 51 aaKnown RBP12.68□□□□□ -0.38
PMS1-213ENST00000441310 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
PMS1-213ENST00000441310 P0DMU3 169 aa12.67□□□□□ -0.38
PMS1-213ENST00000441310 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
PMS1-213ENST00000441310 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
PMS1-213ENST00000441310 CSDC2Q9Y534 153 aaKnown RBP12.67□□□□□ -0.38
PMS1-213ENST00000441310 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
PMS1-213ENST00000441310 IGLV11-55A0A075B6I3 123 aa12.67□□□□□ -0.38
PMS1-213ENST00000441310 CSMD2Q7Z408 3487 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 FAM236AA0A1B0GUQ0 79 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 FAM236BA0A1B0GV22 79 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
PMS1-213ENST00000441310 NDPQ00604 133 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 ZNRF2Q8NHG8 242 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 M0R1W7 72 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 TRIAP1O43715 76 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 CTSGP08311 255 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 PMVKQ15126 192 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
PMS1-213ENST00000441310 AMELXQ99217 191 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 ABCA2Q9BZC7 2435 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 PAPPA-AS1Q5QFB9 102 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.66□□□□□ -0.38
PMS1-213ENST00000441310 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 OOSP1A8MZH6 123 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 IGF1P05019 195 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 PRR9Q5T870 116 aa12.65□□□□□ -0.38
PMS1-213ENST00000441310 C9orf153Q5TBE3 101 aa12.64□□□□□ -0.39
PMS1-213ENST00000441310 NRGNQ92686 78 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms