RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 TMEM244Q5VVB8 128 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 NDUFA11Q86Y39 141 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 UBE2DNLQ8IWF7 75 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 TCTE3Q8IZS6 198 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 C20orf197Q8N268 126 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 COX7B2Q8TF08 81 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 SCP2D1Q9UJQ7 156 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 HLA-DRB4X5D2U9 266 aa-0.18□□□□□ -2.44
LINC00354-202ENST00000440860 AKAP11Q9UKA4 1901 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 PHIPQ8WWQ0 1821 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 TRAV36DV7A0A075B6V5 113 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 CCDC179H3BU77 68 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 DEGS1O15121 323 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 CCL3L1P16619 93 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 SPCS2Q15005 226 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 CTAGE3PQ8IX95 158 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 SMPXQ9UHP9 88 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 DNAJC15Q9Y5T4 150 aa-0.19□□□□□ -2.44
LINC00354-202ENST00000440860 SPTBN2O15020 2390 aa-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 NRXN2Q9P2S2 1712 aa-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 RPL7L1Q6DKI1 246 aaKnown RBP-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 DDA1Q9BW61 102 aa-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 ARFGEF1Q9Y6D6 1849 aa-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 PTPRQQ9UMZ3 2332 aa-0.2□□□□□ -2.44
LINC00354-202ENST00000440860 PTPN13Q12923 2485 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 UHRF1BP1LA0JNW5 1464 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 TRAV12-3A0A0B4J271 114 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 TMEM14DPA8MWL7 114 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 SMIM6P0DI80 62 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 CCDC153Q494R4 210 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 Q6ZRX8 168 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 GINS2Q9Y248 185 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 PKDREJQ9NTG1 2253 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 AKAP6Q13023 2319 aa-0.21□□□□□ -2.44
LINC00354-202ENST00000440860 NSD1Q96L73 2696 aaPredicted RBP-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 TNFSF15O95150 251 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 NPC2P61916 151 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 NCS1P62166 190 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 ATP11AUNQ6ZP68 121 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 SPANXCQ9NY87 97 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 HIGD1AQ9Y241 93 aa-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 SYNE2Q8WXH0 6885 aaKnown RBP-0.22□□□□□ -2.44
LINC00354-202ENST00000440860 FAM208BQ5VWN6 2430 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 SSC5DA1L4H1 1573 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 TRGV1A0A0A0MS02 117 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 A6NIN4 97 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 ZNF815PA8K554 130 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 S100A5P33763 92 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 RPS28P62857 69 aaKnown RBP-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 BATF3Q9NR55 127 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 PRO0255Q9UI72 69 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 FSIP2Q5CZC0 6907 aa-0.23□□□□□ -2.45
LINC00354-202ENST00000440860 CDK5RAP2Q96SN8 1893 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 HMCN2Q8NDA2 5059 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 A0A087WTM6 91 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 A0A1B0GX51 115 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 GNG14A0A1W2PPG7 69 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 FAM92AA1XBS5 289 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 MMGT1Q8N4V1 131 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 SPANXA1Q9NS26 97 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 LSM2Q9Y333 95 aaKnown RBP-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 PLCE1Q9P212 2302 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 PTPRMP28827 1452 aa-0.24□□□□□ -2.45
LINC00354-202ENST00000440860 MYH8P13535 1937 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 ANKRD17O75179 2603 aaKnown RBP-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 A0A0D9SFI3 127 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 H0YJX3 145 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 M0R3E3 92 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 DBIP07108 87 aaKnown RBP-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 SCTP09683 121 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 INSL4Q14641 139 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 SSBP3-AS1Q7Z2R9 100 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 Q96NJ1 140 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 RPRMQ9NS64 109 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 ERCC6Q03468 1493 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 ZNF292O60281 2723 aa-0.25□□□□□ -2.45
LINC00354-202ENST00000440860 TRAV1-2A0A0B4J238 106 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 M0R2P5 195 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 SPANXN1Q5VSR9 72 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 AIF1LQ9BQI0 150 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 NPVFQ9HCQ7 196 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 NDUFA12Q9UI09 145 aa-0.26□□□□□ -2.45
LINC00354-202ENST00000440860 CACNA1AO00555 2505 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 M0R129 80 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 EDDM3BP56851 147 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 DEFB109BQ30KR1 87 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 LINC01545Q5VT33 79 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 VSTM2AQ8TAG5 236 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 PSMG3Q9BT73 122 aaPredicted RBP-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 MRPL40Q9NQ50 206 aaKnown RBP-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 MACF1Q9UPN3 7388 aaKnown RBP-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 MYH6P13533 1939 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 NHSL1Q5SYE7 1610 aa-0.27□□□□□ -2.45
LINC00354-202ENST00000440860 TRAV22A0A0B4J277 110 aa-0.28□□□□□ -2.45
LINC00354-202ENST00000440860 NPFFO15130 113 aa-0.28□□□□□ -2.45
LINC00354-202ENST00000440860 IFNA17P01571 189 aa-0.28□□□□□ -2.45
LINC00354-202ENST00000440860 SPINK8P0C7L1 97 aa-0.28□□□□□ -2.45
LINC00354-202ENST00000440860 SAR1AQ9NR31 198 aa-0.28□□□□□ -2.45
LINC00354-202ENST00000440860 SYNJ1O43426 1573 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms