RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PHLDA3Q9Y5J5 127 aa12.38□□□□□ -0.43
CCDC188-201ENST00000439765 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 A0A0J9YY99 117 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 NUDT3O95989 172 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 P0DMU3 169 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 CTRLP40313 264 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 FAM3BP58499 235 aaPredicted RBP12.37□□□□□ -0.43
CCDC188-201ENST00000439765 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
CCDC188-201ENST00000439765 M0R2P5 195 aa12.36□□□□□ -0.43
CCDC188-201ENST00000439765 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
CCDC188-201ENST00000439765 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 KCNIP4Q6PIL6 250 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 UBE2DNLQ8IWF7 75 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 OR10AG1Q8NH19 301 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 PTH2Q96A98 100 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
CCDC188-201ENST00000439765 S100PP25815 95 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 CACNG7P62955 275 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 A0A1B0GUT8 65 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 M0R381 172 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 SSTP61278 116 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 SPANXN1Q5VSR9 72 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 ZFP82Q8N141 532 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 RASL10AQ92737 203 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 BORCS7Q96B45 105 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 SMCO4Q9NRQ5 59 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
CCDC188-201ENST00000439765 NXPH4O95158 308 aa12.33□□□□□ -0.44
CCDC188-201ENST00000439765 NTF3P20783 257 aa12.33□□□□□ -0.44
CCDC188-201ENST00000439765 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
CCDC188-201ENST00000439765 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
CCDC188-201ENST00000439765 TRAV9-1A0A075B6T8 112 aa12.32□□□□□ -0.44
CCDC188-201ENST00000439765 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
CCDC188-201ENST00000439765 BTF3L4Q96K17 158 aa12.32□□□□□ -0.44
CCDC188-201ENST00000439765 SCO1O75880 301 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 RIGQ13278 110 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 ELOBQ15370 118 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 TWIST1Q15672 202 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 CBLN2Q8IUK8 224 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
CCDC188-201ENST00000439765 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
CCDC188-201ENST00000439765 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
CCDC188-201ENST00000439765 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
CCDC188-201ENST00000439765 FHL2Q14192 279 aa12.29□□□□□ -0.44
CCDC188-201ENST00000439765 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
CCDC188-201ENST00000439765 HECTD4Q9Y4D8 3996 aa12.29□□□□□ -0.44
CCDC188-201ENST00000439765 A0A1B0GW15 77 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 A0A1B0GXF2 115 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 H3BNG1 76 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 PAX4O43316 350 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 YPEL4Q96NS1 127 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 PRO0255Q9UI72 69 aa12.28□□□□□ -0.44
CCDC188-201ENST00000439765 JPT2Q9H910 190 aa12.27□□□□□ -0.44
CCDC188-201ENST00000439765 HHLA3Q9XRX5 114 aa12.27□□□□□ -0.44
CCDC188-201ENST00000439765 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 TRBV24-1A0A075B6N3 115 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 A8MWV9 139 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 RS1O15537 224 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 CRYBA4P53673 196 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 HBBP68871 147 aa12.27□□□□□ -0.45
CCDC188-201ENST00000439765 A0A096LPF7 62 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 CAMPP49913 170 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 CCL18P55774 89 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 AP1S3Q96PC3 154 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
CCDC188-201ENST00000439765 M0R2N4 97 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 S100A8P05109 93 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 CRYGDP07320 174 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 EVI2AP22794 236 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 SMIM15Q7Z3B0 74 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
CCDC188-201ENST00000439765 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 ICOSQ9Y6W8 199 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
CCDC188-201ENST00000439765 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
CCDC188-201ENST00000439765 SLAQ13239 276 aa12.24□□□□□ -0.45
CCDC188-201ENST00000439765 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
CCDC188-201ENST00000439765 TMEM191AQ9H0A3 160 aa12.24□□□□□ -0.45
CCDC188-201ENST00000439765 A0A087WWL8 130 aa12.23□□□□□ -0.45
CCDC188-201ENST00000439765 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
CCDC188-201ENST00000439765 HERC2O95714 4834 aa12.23□□□□□ -0.45
CCDC188-201ENST00000439765 LINC00315P59091 139 aa12.22□□□□□ -0.45
CCDC188-201ENST00000439765 ESRGQ1W209 222 aa12.22□□□□□ -0.45
CCDC188-201ENST00000439765 UFSP1Q6NVU6 142 aa12.22□□□□□ -0.45
CCDC188-201ENST00000439765 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
CCDC188-201ENST00000439765 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
CCDC188-201ENST00000439765 DNAH17Q9UFH2 4485 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms