RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 KCNIP4Q6PIL6 250 aa11.67□□□□□ -0.54
CTDSPL-204ENST00000435525 CNFNQ9BYD5 112 aa11.67□□□□□ -0.54
CTDSPL-204ENST00000435525 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
CTDSPL-204ENST00000435525 A0A1B0GW15 77 aa11.66□□□□□ -0.54
CTDSPL-204ENST00000435525 PAX4O43316 350 aa11.66□□□□□ -0.54
CTDSPL-204ENST00000435525 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
CTDSPL-204ENST00000435525 CLRN3Q8NCR9 226 aa11.66□□□□□ -0.54
CTDSPL-204ENST00000435525 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
CTDSPL-204ENST00000435525 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 A0A087WWL8 130 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 H3BNG1 76 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 S100PP25815 95 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 FHL2Q14192 279 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 TMEM88Q6PEY1 159 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 POM121L12Q8N7R1 296 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 RPS10P5Q9NQ39 176 aa11.65□□□□□ -0.54
CTDSPL-204ENST00000435525 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 A0A087WWC5 75 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 F5H697 171 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 HOXA5P20719 270 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 ZNF56Q15929 161 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 TMEM242Q9NWH2 141 aa11.64□□□□□ -0.55
CTDSPL-204ENST00000435525 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
CTDSPL-204ENST00000435525 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
CTDSPL-204ENST00000435525 GATA1P15976 413 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL-204ENST00000435525 RHOHQ15669 191 aa11.63□□□□□ -0.55
CTDSPL-204ENST00000435525 JPT2Q9H910 190 aa11.63□□□□□ -0.55
CTDSPL-204ENST00000435525 A0A0J9YY99 117 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 H7C1H1 209 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 CRYGDP07320 174 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 MGPP08493 103 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 CRYBA4P53673 196 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 RAB4BP61018 213 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 ATP5L2Q7Z4Y8 100 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 SAMD10Q9BYL1 202 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 MSRB1Q9NZV6 116 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 ICOSQ9Y6W8 199 aa11.62□□□□□ -0.55
CTDSPL-204ENST00000435525 NUDT3O95989 172 aa11.61□□□□□ -0.55
CTDSPL-204ENST00000435525 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
CTDSPL-204ENST00000435525 SH2D6Q7Z4S9 175 aa11.61□□□□□ -0.55
CTDSPL-204ENST00000435525 BTF3L4Q96K17 158 aa11.61□□□□□ -0.55
CTDSPL-204ENST00000435525 HUWE1Q7Z6Z7 4374 aaKnown RBP11.61□□□□□ -0.55
CTDSPL-204ENST00000435525 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
CTDSPL-204ENST00000435525 K7EQD1 137 aa11.6□□□□□ -0.55
CTDSPL-204ENST00000435525 EVI2AP22794 236 aa11.6□□□□□ -0.55
CTDSPL-204ENST00000435525 HBBP68871 147 aa11.6□□□□□ -0.55
CTDSPL-204ENST00000435525 GYPEP15421 78 aa11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 FAM3BP58499 235 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 SLC25A29Q8N8R3 303 aa11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
CTDSPL-204ENST00000435525 TRBV10-1A0A0K0K1A3 114 aa11.58□□□□□ -0.56
CTDSPL-204ENST00000435525 SRIP30626 198 aa11.58□□□□□ -0.56
CTDSPL-204ENST00000435525 CAMPP49913 170 aa11.58□□□□□ -0.56
CTDSPL-204ENST00000435525 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-204ENST00000435525 FRZBQ92765 325 aa11.58□□□□□ -0.56
CTDSPL-204ENST00000435525 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
CTDSPL-204ENST00000435525 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
CTDSPL-204ENST00000435525 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
CTDSPL-204ENST00000435525 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
CTDSPL-204ENST00000435525 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
CTDSPL-204ENST00000435525 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
CTDSPL-204ENST00000435525 MUC4Q99102 2169 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 P0DMU3 169 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 CCL18P55774 89 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 NEGR1Q7Z3B1 354 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 URGCP-MRPS24S4R325 110 aa11.55□□□□□ -0.56
CTDSPL-204ENST00000435525 PPP1R17O96001 155 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 COX19Q49B96 90 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 Q6ZSN1 163 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 UBE2DNLQ8IWF7 75 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 DNAJC30Q96LL9 226 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 TNFRSF18Q9Y5U5 241 aa11.54□□□□□ -0.56
CTDSPL-204ENST00000435525 A0A1B0GXF2 115 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 LINC00315P59091 139 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 GAGE1Q13065 139 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 GAGE4Q13068 117 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 GAGE5Q13069 117 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
CTDSPL-204ENST00000435525 TRBV7-3A0A075B6L6 115 aa11.52□□□□□ -0.57
CTDSPL-204ENST00000435525 A0A096LPF7 62 aa11.52□□□□□ -0.57
CTDSPL-204ENST00000435525 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
CTDSPL-204ENST00000435525 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.57
CTDSPL-204ENST00000435525 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
CTDSPL-204ENST00000435525 M0QY20 66 aa11.51□□□□□ -0.57
CTDSPL-204ENST00000435525 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
CTDSPL-204ENST00000435525 ZNRF2Q8NHG8 242 aa11.51□□□□□ -0.57
CTDSPL-204ENST00000435525 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms