RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 OR8B3Q8NGG8 313 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 SMCR5Q8TEV8 140 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 OR8B2Q96RD0 313 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 CXCL16Q9H2A7 254 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ICOSQ9Y6W8 199 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 LAMB1P07942 1786 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ATP10BO94823 1461 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 SEC16AO15027 2179 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ABCA6Q8N139 1617 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 MPDZO75970 2070 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 CFAP74Q9C0B2 1584 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 TNS1Q9HBL0 1735 aaKnown RBP1.51□□□□□ -2.17
CLK1-204ENST00000432425 TRBV24-1A0A075B6N3 115 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 IGKV1D-37A0A075B6S9 117 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 NPYP01303 97 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 IGHV1-46P01743 117 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ATP5EP56381 51 aaPredicted RBP1.51□□□□□ -2.17
CLK1-204ENST00000432425 RHOHQ15669 191 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 LYZL1Q6UWQ5 148 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 LYZL2Q7Z4W2 148 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 C15orf53Q8NAA6 179 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 HIGD1BQ9P298 99 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 PXDNQ92626 1479 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 CLTCQ00610 1675 aaKnown RBP1.51□□□□□ -2.17
CLK1-204ENST00000432425 PTPN23Q9H3S7 1636 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ESPL1Q14674 2120 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 XRN1Q8IZH2 1706 aaKnown RBP1.5□□□□□ -2.17
CLK1-204ENST00000432425 EFCAB5A4FU69 1503 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 ABCC2Q92887 1545 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 MYOFQ9NZM1 2061 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 NCOA2Q15596 1464 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 LTBP2Q14767 1821 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 LAMA4Q16363 1823 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 ARFGEF1Q9Y6D6 1849 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 TRAV14DV4A0A0A6YYC5 116 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 IGHV3-73A0A0B4J1V6 119 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 IGHV1-3A0A0C4DH29 117 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 NAP1L6A6NFF2 107 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 HMSDA8MTL9 139 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 C17orf98A8MV24 154 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 IBA57-AS1B1ANH7 110 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 C5orf67F2Z3F1 127 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 CLPSP04118 112 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 TFF1P04155 84 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 UBE2G1P62253 170 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 CCL8P80075 99 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 ZNF345Q14585 488 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 C1orf134Q5TEV5 83 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 C12orf73Q69YU5 71 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 COMMD6Q7Z4G1 85 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 MIR7-3HGQ8N6C7 128 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 MYOZ3Q8TDC0 251 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 MUCL1Q96DR8 90 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 NDUFA12Q9UI09 145 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 RABAC1Q9UI14 185 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 BAZ2BQ9UIF8 2168 aaKnown RBP1.5□□□□□ -2.17
CLK1-204ENST00000432425 MYO3AQ8NEV4 1616 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 RIC1Q4ADV7 1423 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 EDC4Q6P2E9 1401 aaKnown RBP1.5□□□□□ -2.17
CLK1-204ENST00000432425 PLXNC1O60486 1568 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 TIAM1Q13009 1591 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 ARHGAP32A7KAX9 2087 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 DUOX2Q9NRD8 1548 aa1.5□□□□□ -2.17
CLK1-204ENST00000432425 SCN4AP35499 1836 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 LRP5O75197 1615 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 IGKV1D-42A0A075B6H8 117 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 TRAV17A0A0B4J275 112 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 CCL16O15467 120 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 CPSF4O95639 269 aaKnown RBP1.49□□□□□ -2.17
CLK1-204ENST00000432425 CRPP02741 224 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 MSMBP08118 114 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 XCL1P47992 114 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 ROMO1P60602 79 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 GNG11P61952 73 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 ZNF117Q03924 483 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 ESRGQ1W209 222 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 FAM27BQ5VT28 67 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 ZCCHC23Q6ZST2 131 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 LINC00269Q8N2A0 174 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 LINC01560Q8TB33 94 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 NXT2Q9NPJ8 142 aaKnown RBP1.49□□□□□ -2.17
CLK1-204ENST00000432425 BLMP54132 1417 aaPredicted RBP1.49□□□□□ -2.17
CLK1-204ENST00000432425 URB2Q14146 1524 aaKnown RBP1.49□□□□□ -2.17
CLK1-204ENST00000432425 CROCC2H7BZ55 1655 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 HEATR5BQ9P2D3 2071 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 LAMC1P11047 1609 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 CDK12Q9NYV4 1490 aaPredicted RBP1.49□□□□□ -2.17
CLK1-204ENST00000432425 GLI2P10070 1586 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 DIP2AQ14689 1571 aa1.49□□□□□ -2.17
CLK1-204ENST00000432425 IGHV3-15A0A0B4J1V0 119 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 TRAV2A0A0B4J234 112 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 hDV103S1A0JD37 113 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 LYRM1O43325 122 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 SFTA3P0C7M3 94 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 PIPP12273 146 aaPredicted RBP1.48□□□□□ -2.17
CLK1-204ENST00000432425 ELOBQ15370 118 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 PMCHL1Q16048 86 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms