RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 TRAV1-1A0A0B4J248 108 aa11.87□□□□□ -0.51
NUP50-208ENST00000430547 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
NUP50-208ENST00000430547 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
NUP50-208ENST00000430547 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
NUP50-208ENST00000430547 A0A087WTM6 91 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 A0A087WWC5 75 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 SULT1A2P50226 295 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 CCL20P78556 96 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 RPL19P84098 196 aaKnown RBP11.86□□□□□ -0.51
NUP50-208ENST00000430547 CDPF1Q6NVV7 123 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 Q9HAA7 133 aa11.86□□□□□ -0.51
NUP50-208ENST00000430547 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 IFNA1P01562 189 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 C1QBP02746 253 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 CXCL1P09341 107 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 SLC51BQ86UW2 128 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 RYR1P21817 5038 aa11.85□□□□□ -0.51
NUP50-208ENST00000430547 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
NUP50-208ENST00000430547 C11orf52Q96A22 123 aa11.84□□□□□ -0.51
NUP50-208ENST00000430547 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
NUP50-208ENST00000430547 LAGE3Q14657 143 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 ZNF56Q15929 161 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 AKAP14Q86UN6 197 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 OR10AG1Q8NH19 301 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
NUP50-208ENST00000430547 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 PDE6DO43924 150 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
NUP50-208ENST00000430547 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
NUP50-208ENST00000430547 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 Q6ZNX1 250 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
NUP50-208ENST00000430547 DAZAP1Q96EP5 407 aaKnown RBP11.82□□□□□ -0.52
NUP50-208ENST00000430547 Q9UF83 564 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
NUP50-208ENST00000430547 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
NUP50-208ENST00000430547 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
NUP50-208ENST00000430547 FUSP35637 526 aaKnown RBP eCLIP11.81□□□□□ -0.52
NUP50-208ENST00000430547 GNG4P50150 75 aa11.81□□□□□ -0.52
NUP50-208ENST00000430547 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
NUP50-208ENST00000430547 SNAI2O43623 268 aa11.8□□□□□ -0.52
NUP50-208ENST00000430547 RAB4BP61018 213 aa11.8□□□□□ -0.52
NUP50-208ENST00000430547 TOR2AQ5JU69 321 aa11.8□□□□□ -0.52
NUP50-208ENST00000430547 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 SMIM17P0DL12 118 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 BCL2P10415 239 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 SSTP61278 116 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 KCNIP4Q6PIL6 250 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
NUP50-208ENST00000430547 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 SSBP4Q9BWG4 385 aaPredicted RBP11.79□□□□□ -0.52
NUP50-208ENST00000430547 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
NUP50-208ENST00000430547 TRAV8-3A0A0A6YYJ7 113 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 F5H697 171 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 TAGLN2P37802 199 aaKnown RBP11.78□□□□□ -0.52
NUP50-208ENST00000430547 RPS20P60866 119 aaKnown RBP11.78□□□□□ -0.52
NUP50-208ENST00000430547 Q8N3U1 123 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 AP1S3Q96PC3 154 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 TPPP3Q9BW30 176 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
NUP50-208ENST00000430547 HSPG2P98160 4391 aa11.77□□□□□ -0.53
NUP50-208ENST00000430547 RAB19A4D1S5 217 aa11.77□□□□□ -0.53
NUP50-208ENST00000430547 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.53
NUP50-208ENST00000430547 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
NUP50-208ENST00000430547 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
NUP50-208ENST00000430547 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.53
NUP50-208ENST00000430547 A0A087WX48 190 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 XKRY2A2RUG3 117 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 P01737 135 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 UBE2D3P61077 147 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 UBE2D2P62837 147 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 DNAH5Q8TE73 4624 aa11.76□□□□□ -0.53
NUP50-208ENST00000430547 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 IGLV2-8P01709 118 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 NIT1Q86X76 327 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 Q8N1X5 172 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 C9orf62Q8N4C0 152 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
NUP50-208ENST00000430547 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
NUP50-208ENST00000430547 GZMBP10144 247 aa11.74□□□□□ -0.53
NUP50-208ENST00000430547 GCSHP23434 173 aa11.74□□□□□ -0.53
NUP50-208ENST00000430547 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
NUP50-208ENST00000430547 RMI2Q96E14 147 aa11.74□□□□□ -0.53
NUP50-208ENST00000430547 KRTAP4-5Q9BYR2 181 aa11.74□□□□□ -0.53
NUP50-208ENST00000430547 C19orf71A6NCJ1 209 aa11.73□□□□□ -0.53
NUP50-208ENST00000430547 CACNG7P62955 275 aa11.73□□□□□ -0.53
NUP50-208ENST00000430547 ELOBQ15370 118 aa11.73□□□□□ -0.53
NUP50-208ENST00000430547 Q8N814 137 aa11.73□□□□□ -0.53
NUP50-208ENST00000430547 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms