RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 SSTP61278 116 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 GTSF1LQ9H1H1 148 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 Q9UF83 564 aa10.37□□□□□ -0.75
RPL28-203ENST00000428193 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 MEF2BQ02080 365 aaPredicted RBP10.36□□□□□ -0.75
RPL28-203ENST00000428193 LELP1Q5T871 98 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 UFSP1Q6NVU6 142 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
RPL28-203ENST00000428193 KRTAP10-2P60368 255 aa10.35□□□□□ -0.75
RPL28-203ENST00000428193 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
RPL28-203ENST00000428193 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
RPL28-203ENST00000428193 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
RPL28-203ENST00000428193 EREGO14944 169 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 PDE6DO43924 150 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 BCL2P10415 239 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
RPL28-203ENST00000428193 GNG4P50150 75 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 DAZAP1Q96EP5 407 aaKnown RBP10.34□□□□□ -0.75
RPL28-203ENST00000428193 Q9HAA7 133 aa10.34□□□□□ -0.75
RPL28-203ENST00000428193 K7EP13 123 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 CXCL1P09341 107 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 ZNF56Q15929 161 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 TPPP3Q9BW30 176 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 VAX2Q9UIW0 290 aa10.33□□□□□ -0.76
RPL28-203ENST00000428193 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
RPL28-203ENST00000428193 GZMBP10144 247 aa10.32□□□□□ -0.76
RPL28-203ENST00000428193 Q8N3U1 123 aa10.32□□□□□ -0.76
RPL28-203ENST00000428193 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
RPL28-203ENST00000428193 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
RPL28-203ENST00000428193 SNAI2O43623 268 aa10.31□□□□□ -0.76
RPL28-203ENST00000428193 PSCAO43653 123 aa10.31□□□□□ -0.76
RPL28-203ENST00000428193 OR5AL1P0C617 328 aa10.31□□□□□ -0.76
RPL28-203ENST00000428193 NKX2-5P52952 324 aaPredicted RBP10.31□□□□□ -0.76
RPL28-203ENST00000428193 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
RPL28-203ENST00000428193 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
RPL28-203ENST00000428193 A0A087WTM6 91 aa10.3□□□□□ -0.76
RPL28-203ENST00000428193 RBFOX3A6NFN3 312 aa10.3□□□□□ -0.76
RPL28-203ENST00000428193 F5H697 171 aa10.3□□□□□ -0.76
RPL28-203ENST00000428193 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
RPL28-203ENST00000428193 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
RPL28-203ENST00000428193 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
RPL28-203ENST00000428193 A0A087WWC5 75 aa10.29□□□□□ -0.76
RPL28-203ENST00000428193 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
RPL28-203ENST00000428193 P01737 135 aa10.29□□□□□ -0.76
RPL28-203ENST00000428193 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
RPL28-203ENST00000428193 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
RPL28-203ENST00000428193 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
RPL28-203ENST00000428193 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 TAGLN2P37802 199 aaKnown RBP10.28□□□□□ -0.76
RPL28-203ENST00000428193 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
RPL28-203ENST00000428193 RAB4BP61018 213 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 AP1S3Q96PC3 154 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 RYR1P21817 5038 aa10.28□□□□□ -0.76
RPL28-203ENST00000428193 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
RPL28-203ENST00000428193 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
RPL28-203ENST00000428193 MGPP08493 103 aa10.27□□□□□ -0.77
RPL28-203ENST00000428193 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
RPL28-203ENST00000428193 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
RPL28-203ENST00000428193 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
RPL28-203ENST00000428193 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 CEBPGP53567 150 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 UBE2D3P61077 147 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 UBE2D2P62837 147 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 BIN3Q9NQY0 253 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
RPL28-203ENST00000428193 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
RPL28-203ENST00000428193 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
RPL28-203ENST00000428193 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
RPL28-203ENST00000428193 HSPG2P98160 4391 aa10.25□□□□□ -0.77
RPL28-203ENST00000428193 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
RPL28-203ENST00000428193 CACNG7P62955 275 aa10.24□□□□□ -0.77
RPL28-203ENST00000428193 TOR2AQ5JU69 321 aa10.24□□□□□ -0.77
RPL28-203ENST00000428193 OR10G8Q8NGN5 311 aa10.24□□□□□ -0.77
RPL28-203ENST00000428193 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
RPL28-203ENST00000428193 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
RPL28-203ENST00000428193 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
RPL28-203ENST00000428193 A0A087WX48 190 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 LAGE3Q14657 143 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 KCNIP4Q6PIL6 250 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 NIT1Q86X76 327 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
RPL28-203ENST00000428193 KIF25-AS1Q9Y6Z4 181 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms