RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CRYGDP07320 174 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 TIRAPP58753 221 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 LINC01559Q495D7 138 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 FAM74A4Q5TZK3 123 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 PRR27Q6MZM9 219 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 C10orf126Q8N4M7 172 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 JPT2Q9H910 190 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 BIN3Q9NQY0 253 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 MSRB1Q9NZV6 116 aa14.07□□□□□ -0.16
HSPG2-205ENST00000427897 RAB19A4D1S5 217 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 GAGE12JA6NER3 117 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 DNAH10OSP0CZ25 163 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 CEBPGP53567 150 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 GAGE1Q13065 139 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 GAGE4Q13068 117 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 GAGE5Q13069 117 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 GAGE13Q4V321 117 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 ZFP82Q8N141 532 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 TNFRSF18Q9Y5U5 241 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 DNAH17Q9UFH2 4485 aa14.06□□□□□ -0.16
HSPG2-205ENST00000427897 FAT2Q9NYQ8 4349 aa14.05□□□□□ -0.16
HSPG2-205ENST00000427897 SRP19P09132 144 aaKnown RBP14.05□□□□□ -0.16
HSPG2-205ENST00000427897 ERVFC1-1P60608 527 aa14.05□□□□□ -0.16
HSPG2-205ENST00000427897 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
HSPG2-205ENST00000427897 SAMD10Q9BYL1 202 aa14.04□□□□□ -0.16
HSPG2-205ENST00000427897 TRBV20OR9-2A0A075B6H5 130 aa14.03□□□□□ -0.16
HSPG2-205ENST00000427897 LELP1Q5T871 98 aa14.03□□□□□ -0.16
HSPG2-205ENST00000427897 Q6ZSN1 163 aa14.03□□□□□ -0.16
HSPG2-205ENST00000427897 DAZAP1Q96EP5 407 aaKnown RBP14.03□□□□□ -0.16
HSPG2-205ENST00000427897 SMIM7Q9BQ49 75 aa14.03□□□□□ -0.16
HSPG2-205ENST00000427897 A0A087WWL8 130 aa14.02□□□□□ -0.17
HSPG2-205ENST00000427897 IGLV2-8P01709 118 aa14.02□□□□□ -0.17
HSPG2-205ENST00000427897 RPL19P84098 196 aaKnown RBP14.02□□□□□ -0.17
HSPG2-205ENST00000427897 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.17
HSPG2-205ENST00000427897 SFRP2Q96HF1 295 aa14.02□□□□□ -0.17
HSPG2-205ENST00000427897 PSCAO43653 123 aa14.01□□□□□ -0.17
HSPG2-205ENST00000427897 SCRT2Q9NQ03 307 aa14.01□□□□□ -0.17
HSPG2-205ENST00000427897 ZNF727A8MUV8 499 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 IGHV3-30P01768 117 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 IGHV3-33P01772 117 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 IGHV3-30-3P0DP02 117 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 IGHV3-30-5P0DP03 117 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 SPANXN1Q5VSR9 72 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 Q6ZRN7 208 aaPredicted RBP14□□□□□ -0.17
HSPG2-205ENST00000427897 C14orf178Q8N769 122 aaPredicted RBP14□□□□□ -0.17
HSPG2-205ENST00000427897 PKD1P98161 4303 aa14□□□□□ -0.17
HSPG2-205ENST00000427897 SSTP61278 116 aa13.99□□□□□ -0.17
HSPG2-205ENST00000427897 SRSF3P84103 164 aaKnown RBP13.99□□□□□ -0.17
HSPG2-205ENST00000427897 LINC01556Q5JQF7 62 aa13.99□□□□□ -0.17
HSPG2-205ENST00000427897 A0A087WWC5 75 aa13.98□□□□□ -0.17
HSPG2-205ENST00000427897 CXCL1P09341 107 aa13.98□□□□□ -0.17
HSPG2-205ENST00000427897 UFSP1Q6NVU6 142 aa13.98□□□□□ -0.17
HSPG2-205ENST00000427897 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
HSPG2-205ENST00000427897 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
HSPG2-205ENST00000427897 C9JQL5 133 aa13.97□□□□□ -0.17
HSPG2-205ENST00000427897 P01737 135 aa13.97□□□□□ -0.17
HSPG2-205ENST00000427897 RPL36AP83881 106 aaKnown RBP13.97□□□□□ -0.17
HSPG2-205ENST00000427897 RPL36ALQ969Q0 106 aaKnown RBP13.97□□□□□ -0.17
HSPG2-205ENST00000427897 Q9HAA7 133 aa13.97□□□□□ -0.17
HSPG2-205ENST00000427897 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
HSPG2-205ENST00000427897 KRTAP10-2P60368 255 aa13.96□□□□□ -0.17
HSPG2-205ENST00000427897 ZNF56Q15929 161 aa13.96□□□□□ -0.17
HSPG2-205ENST00000427897 OR10AG1Q8NH19 301 aa13.96□□□□□ -0.17
HSPG2-205ENST00000427897 URGCP-MRPS24S4R325 110 aa13.96□□□□□ -0.17
HSPG2-205ENST00000427897 MUC21A0A0G2JKD1 596 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 MUC21A0A140T8X8 626 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 XKRY2A2RUG3 117 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 C19orf71A6NCJ1 209 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 IBA57-AS1B1ANH7 110 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 RPS20P60866 119 aaKnown RBP13.95□□□□□ -0.18
HSPG2-205ENST00000427897 TMEM241Q24JQ0 296 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 UQCC3Q6UW78 93 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-205ENST00000427897 TPPP3Q9BW30 176 aa13.95□□□□□ -0.18
HSPG2-205ENST00000427897 F5H697 171 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 K7EN84 100 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 RAB4BP61018 213 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 Q9UF83 564 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
HSPG2-205ENST00000427897 PKHD1P08F94 4074 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 A0A087WTM6 91 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 TRBV10-1A0A0K0K1A3 114 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 OR5AL1P0C617 328 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 KCNIP4Q6PIL6 250 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 OR2D3Q8NGH3 330 aa13.93□□□□□ -0.18
HSPG2-205ENST00000427897 SNAI2O43623 268 aa13.92□□□□□ -0.18
HSPG2-205ENST00000427897 CDK2AP2O75956 126 aa13.92□□□□□ -0.18
HSPG2-205ENST00000427897 FAM231DQ6ZW35 169 aa13.92□□□□□ -0.18
HSPG2-205ENST00000427897 NUDT10Q8NFP7 164 aa13.92□□□□□ -0.18
HSPG2-205ENST00000427897 NUDT11Q96G61 164 aa13.92□□□□□ -0.18
HSPG2-205ENST00000427897 SSBP4Q9BWG4 385 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-205ENST00000427897 TRBV7-3A0A075B6L6 115 aa13.91□□□□□ -0.18
HSPG2-205ENST00000427897 LINC00862A6NCI5 91 aa13.91□□□□□ -0.18
HSPG2-205ENST00000427897 LINC00694P0DN24 101 aa13.91□□□□□ -0.18
HSPG2-205ENST00000427897 COMMD7Q86VX2 200 aa13.91□□□□□ -0.18
HSPG2-205ENST00000427897 TM2D2Q9BX73 214 aa13.91□□□□□ -0.18
HSPG2-205ENST00000427897 RPP21Q9H633 154 aaKnown RBP13.91□□□□□ -0.18
HSPG2-205ENST00000427897 CDPF1Q6NVV7 123 aa13.9□□□□□ -0.18
HSPG2-205ENST00000427897 FER1L6-AS1Q8NA97 138 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms