RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 OR10AG1Q8NH19 301 aa10.11□□□□□ -0.79
RTN4-210ENST00000427710 SFRP2Q96HF1 295 aa10.11□□□□□ -0.79
RTN4-210ENST00000427710 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
RTN4-210ENST00000427710 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 PDE6DO43924 150 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 CRYGDP07320 174 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 GNG4P50150 75 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 LY96Q9Y6Y9 160 aa10.1□□□□□ -0.79
RTN4-210ENST00000427710 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
RTN4-210ENST00000427710 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
RTN4-210ENST00000427710 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
RTN4-210ENST00000427710 SNAI2O43623 268 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 CXCL1P09341 107 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 BLOC1S1P78537 153 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 OR10J3Q5JRS4 329 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
RTN4-210ENST00000427710 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 RYR1P21817 5038 aa10.08□□□□□ -0.8
RTN4-210ENST00000427710 C19orf71A6NCJ1 209 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 RHODO00212 210 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 TIRAPP58753 221 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 OR2D3Q8NGH3 330 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
RTN4-210ENST00000427710 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
RTN4-210ENST00000427710 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
RTN4-210ENST00000427710 HSPG2P98160 4391 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 IGHV3-30-3P0DP02 117 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 EVI2AP22794 236 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 LELP1Q5T871 98 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 Q8N3U1 123 aa10.06□□□□□ -0.8
RTN4-210ENST00000427710 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
RTN4-210ENST00000427710 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 K7EN84 100 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 OR5AL1P0C617 328 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.81e-8■□□□□ 8.2
RTN4-210ENST00000427710 CEBPGP53567 150 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 ZNF56Q15929 161 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 LYPD6BQ8NI32 183 aa10.05□□□□□ -0.8
RTN4-210ENST00000427710 P01737 135 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 TAGLN2P37802 199 aaKnown RBP10.04□□□□□ -0.8
RTN4-210ENST00000427710 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 NUDT10Q8NFP7 164 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 OCC1Q8TAD7 63 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
RTN4-210ENST00000427710 C16orf90A8MZG2 172 aa10.03□□□□□ -0.8
RTN4-210ENST00000427710 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
RTN4-210ENST00000427710 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
RTN4-210ENST00000427710 LINC01556Q5JQF7 62 aa10.03□□□□□ -0.8
RTN4-210ENST00000427710 SMIM12Q96EX1 92 aa10.03□□□□□ -0.8
RTN4-210ENST00000427710 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
RTN4-210ENST00000427710 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
RTN4-210ENST00000427710 RAB4BP61018 213 aa10.02□□□□□ -0.81
RTN4-210ENST00000427710 Q9HAA7 133 aa10.02□□□□□ -0.81
RTN4-210ENST00000427710 F5H697 171 aa10.01□□□□□ -0.81
RTN4-210ENST00000427710 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
RTN4-210ENST00000427710 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
RTN4-210ENST00000427710 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
RTN4-210ENST00000427710 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
RTN4-210ENST00000427710 MGPP08493 103 aa10□□□□□ -0.81
RTN4-210ENST00000427710 UBE2D3P61077 147 aa10□□□□□ -0.81
RTN4-210ENST00000427710 UBE2D2P62837 147 aa10□□□□□ -0.81
RTN4-210ENST00000427710 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
RTN4-210ENST00000427710 NFE4Q86UQ8 179 aa10□□□□□ -0.81
RTN4-210ENST00000427710 C10orf126Q8N4M7 172 aa10□□□□□ -0.81
RTN4-210ENST00000427710 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
RTN4-210ENST00000427710 BIN3Q9NQY0 253 aa10□□□□□ -0.81
RTN4-210ENST00000427710 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
RTN4-210ENST00000427710 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
RTN4-210ENST00000427710 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
RTN4-210ENST00000427710 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
RTN4-210ENST00000427710 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
RTN4-210ENST00000427710 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
RTN4-210ENST00000427710 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
RTN4-210ENST00000427710 XKRY2A2RUG3 117 aa9.98□□□□□ -0.81
RTN4-210ENST00000427710 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
RTN4-210ENST00000427710 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
RTN4-210ENST00000427710 CACNG7P62955 275 aa9.98□□□□□ -0.81
RTN4-210ENST00000427710 DAZ4Q86SG3 579 aaKnown RBP9.98□□□□□ -0.81
RTN4-210ENST00000427710 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
RTN4-210ENST00000427710 DAZ3Q9NR90 486 aaKnown RBP9.98□□□□□ -0.81
RTN4-210ENST00000427710 A0A087WTM6 91 aa9.97□□□□□ -0.81
RTN4-210ENST00000427710 K7EP13 123 aa9.97□□□□□ -0.81
RTN4-210ENST00000427710 ERVFC1-1P60608 527 aa9.97□□□□□ -0.81
RTN4-210ENST00000427710 OR10G8Q8NGN5 311 aa9.97□□□□□ -0.81
RTN4-210ENST00000427710 A0A087WWC5 75 aa9.96□□□□□ -0.82
RTN4-210ENST00000427710 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
RTN4-210ENST00000427710 NTF3P20783 257 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms