RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 RHOHQ15669 191 aa17.67■□□□□ 0.42
TSPAN3-203ENST00000424443 RNF212Q495C1 297 aa17.67■□□□□ 0.42
TSPAN3-203ENST00000424443 CT83Q5H943 113 aa17.67■□□□□ 0.42
TSPAN3-203ENST00000424443 SLC25A29Q8N8R3 303 aa17.67■□□□□ 0.42
TSPAN3-203ENST00000424443 KMT2CQ8NEZ4 4911 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-203ENST00000424443 SMIM17P0DL12 118 aa17.66■□□□□ 0.42
TSPAN3-203ENST00000424443 SRIP30626 198 aa17.66■□□□□ 0.42
TSPAN3-203ENST00000424443 AP1S3Q96PC3 154 aa17.66■□□□□ 0.42
TSPAN3-203ENST00000424443 K7EQD1 137 aa17.65■□□□□ 0.42
TSPAN3-203ENST00000424443 UQCC3Q6UW78 93 aa17.65■□□□□ 0.42
TSPAN3-203ENST00000424443 CRYGDP07320 174 aa17.64■□□□□ 0.41
TSPAN3-203ENST00000424443 UFSP1Q6NVU6 142 aa17.64■□□□□ 0.41
TSPAN3-203ENST00000424443 ALMS1Q8TCU4 4167 aa17.63■□□□□ 0.41
TSPAN3-203ENST00000424443 CTRLP40313 264 aa17.63■□□□□ 0.41
TSPAN3-203ENST00000424443 OR10G8Q8NGN5 311 aa17.63■□□□□ 0.41
TSPAN3-203ENST00000424443 WDR73Q6P4I2 378 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 NEGR1Q7Z3B1 354 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 C14orf178Q8N769 122 aaPredicted RBP17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 LOC100131303A0A0U1RQF7 123 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 NTF3P20783 257 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 ZNF56Q15929 161 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 COMMD7Q86VX2 200 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 TSKUQ8WUA8 353 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 GTSF1Q8WW33 167 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 BORCS7Q96B45 105 aa17.62■□□□□ 0.41
TSPAN3-203ENST00000424443 TRGC1P0CF51 173 aa17.61■□□□□ 0.41
TSPAN3-203ENST00000424443 FAM3BP58499 235 aaPredicted RBP17.61■□□□□ 0.41
TSPAN3-203ENST00000424443 TWIST1Q15672 202 aa17.61■□□□□ 0.41
TSPAN3-203ENST00000424443 Q6ZSN1 163 aa17.61■□□□□ 0.41
TSPAN3-203ENST00000424443 SH2D6Q7Z4S9 175 aa17.61■□□□□ 0.41
TSPAN3-203ENST00000424443 ESRGQ1W209 222 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 PGLYRP4Q96LB8 373 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 GFRA4Q9GZZ7 299 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 MSRB1Q9NZV6 116 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 LINC00588Q9Y4M8 146 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 V9GYV3 84 aa17.6■□□□□ 0.41
TSPAN3-203ENST00000424443 F5H697 171 aa17.59■□□□□ 0.41
TSPAN3-203ENST00000424443 FAM231BA6NCW3 169 aa17.58■□□□□ 0.41
TSPAN3-203ENST00000424443 RAB4BP61018 213 aa17.58■□□□□ 0.41
TSPAN3-203ENST00000424443 PNRC1Q12796 327 aaPredicted RBP17.58■□□□□ 0.41
TSPAN3-203ENST00000424443 CNFNQ9BYD5 112 aa17.58■□□□□ 0.41
TSPAN3-203ENST00000424443 HIGD1CA8MV81 97 aa17.57■□□□□ 0.4
TSPAN3-203ENST00000424443 FOXA3P55318 350 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-203ENST00000424443 MGPP08493 103 aa17.57■□□□□ 0.4
TSPAN3-203ENST00000424443 SMIM15Q7Z3B0 74 aa17.57■□□□□ 0.4
TSPAN3-203ENST00000424443 LINC00862A6NCI5 91 aa17.56■□□□□ 0.4
TSPAN3-203ENST00000424443 TMEM218A2RU14 115 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 GAGE12JA6NER3 117 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 F8W036 122 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 GAGE1Q13065 139 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 GAGE4Q13068 117 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 GAGE5Q13069 117 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 GAGE13Q4V321 117 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 LYPD5Q6UWN5 251 aa17.55■□□□□ 0.4
TSPAN3-203ENST00000424443 EVI2AP22794 236 aa17.54■□□□□ 0.4
TSPAN3-203ENST00000424443 DPH3P1Q9H4G8 78 aa17.54■□□□□ 0.4
TSPAN3-203ENST00000424443 MRPS16Q9Y3D3 137 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-203ENST00000424443 SACSQ9NZJ4 4579 aa17.54■□□□□ 0.4
TSPAN3-203ENST00000424443 NAT8BQ9UHF3 227 aa17.53■□□□□ 0.4
TSPAN3-203ENST00000424443 KIF25-AS1Q9Y6Z4 181 aa17.53■□□□□ 0.4
TSPAN3-203ENST00000424443 TRBV10-1A0A0K0K1A3 114 aa17.52■□□□□ 0.4
TSPAN3-203ENST00000424443 A0A1B0GUT8 65 aa17.52■□□□□ 0.4
TSPAN3-203ENST00000424443 PPP1R2P9O14990 202 aa17.52■□□□□ 0.4
TSPAN3-203ENST00000424443 ATP6V0E2Q8NHE4 81 aa17.52■□□□□ 0.4
TSPAN3-203ENST00000424443 DNAH1Q9P2D7 4330 aa17.52■□□□□ 0.4
TSPAN3-203ENST00000424443 IGLV2-18A0A075B6J9 118 aa17.52■□□□□ 0.39
TSPAN3-203ENST00000424443 RPL36AP83881 106 aaKnown RBP17.52■□□□□ 0.39
TSPAN3-203ENST00000424443 ZNRF2Q8NHG8 242 aa17.52■□□□□ 0.39
TSPAN3-203ENST00000424443 RPL36ALQ969Q0 106 aaKnown RBP17.52■□□□□ 0.39
TSPAN3-203ENST00000424443 UPK3BQ9BT76 320 aa17.51■□□□□ 0.39
TSPAN3-203ENST00000424443 H7C1H1 209 aa17.5■□□□□ 0.39
TSPAN3-203ENST00000424443 NUP35Q8NFH5 326 aa17.5■□□□□ 0.39
TSPAN3-203ENST00000424443 Q9H8V8 135 aa17.5■□□□□ 0.39
TSPAN3-203ENST00000424443 MT-ND4LP03901 98 aa17.49■□□□□ 0.39
TSPAN3-203ENST00000424443 LINC00315P59091 139 aa17.49■□□□□ 0.39
TSPAN3-203ENST00000424443 SEC11CQ9BY50 192 aa17.49■□□□□ 0.39
TSPAN3-203ENST00000424443 Q9UF83 564 aa17.49■□□□□ 0.39
TSPAN3-203ENST00000424443 SMIM27A0A1W2PRY6 76 aa17.48■□□□□ 0.39
TSPAN3-203ENST00000424443 RIGQ13278 110 aa17.48■□□□□ 0.39
TSPAN3-203ENST00000424443 ANAPC16Q96DE5 110 aa17.48■□□□□ 0.39
TSPAN3-203ENST00000424443 TRBV7-3A0A075B6L6 115 aa17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 M0R2N4 97 aa17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 ADCYAP1P18509 176 aa17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 GTSF1LQ9H1H1 148 aa17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 VPS13DQ5THJ4 4388 aa17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-203ENST00000424443 SIVA1O15304 175 aa17.46■□□□□ 0.39
TSPAN3-203ENST00000424443 TIRAPP58753 221 aa17.46■□□□□ 0.39
TSPAN3-203ENST00000424443 SUMO4Q6EEV6 95 aa17.46■□□□□ 0.39
TSPAN3-203ENST00000424443 LINC00694P0DN24 101 aa17.45■□□□□ 0.38
TSPAN3-203ENST00000424443 NEXN-AS1Q8NBZ9 246 aa17.45■□□□□ 0.38
TSPAN3-203ENST00000424443 TRAV8-6A0A0B4J262 113 aa17.43■□□□□ 0.38
TSPAN3-203ENST00000424443 OR10J3Q5JRS4 329 aa17.43■□□□□ 0.38
TSPAN3-203ENST00000424443 TNFRSF18Q9Y5U5 241 aa17.43■□□□□ 0.38
TSPAN3-203ENST00000424443 M0QY20 66 aa17.42■□□□□ 0.38
TSPAN3-203ENST00000424443 RASL11AQ6T310 242 aa17.42■□□□□ 0.38
TSPAN3-203ENST00000424443 TMEM191AQ9H0A3 160 aa17.42■□□□□ 0.38
TSPAN3-203ENST00000424443 KMT2AQ03164 3969 aa17.42■□□□□ 0.38
TSPAN3-203ENST00000424443 NBDYA0A0U1RRE5 68 aa17.42■□□□□ 0.38
TSPAN3-203ENST00000424443 UBE2D3P61077 147 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms