RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SSTP61278 116 aa6.24□□□□□ -1.41
NUP50-206ENST00000422489 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
NUP50-206ENST00000422489 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
NUP50-206ENST00000422489 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
NUP50-206ENST00000422489 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
NUP50-206ENST00000422489 HMSDA8MTL9 139 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 UMAD1C9J7I0 102 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 BCL2L11O43521 198 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 LTAP01374 205 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 S100A9P06702 114 aaKnown RBP6.23□□□□□ -1.41
NUP50-206ENST00000422489 GCSHP23434 173 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 EIF5AP63241 154 aaKnown RBP6.23□□□□□ -1.41
NUP50-206ENST00000422489 ZNF345Q14585 488 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 COX8CQ7Z4L0 72 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 BAGE2Q86Y30 109 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 SFRP2Q96HF1 295 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 TCEAL7Q9BRU2 100 aa6.23□□□□□ -1.41
NUP50-206ENST00000422489 A0A087WWC5 75 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 IGLV5-52A0A0A0MRZ9 124 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 MUC21A0A0G2JKD1 596 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 MUC21A0A140T8X8 626 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 SCO2A0A1W2PP80 73 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 RHODO00212 210 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 XGP55808 180 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 PRR27Q6MZM9 219 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 UFSP1Q6NVU6 142 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
NUP50-206ENST00000422489 ZFP82Q8N141 532 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 Q8N3U1 123 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
NUP50-206ENST00000422489 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
NUP50-206ENST00000422489 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.41
NUP50-206ENST00000422489 LRCOL1A6NCL2 159 aa6.21□□□□□ -1.42
NUP50-206ENST00000422489 EPM2AB3EWF7 344 aa6.21□□□□□ -1.42
NUP50-206ENST00000422489 CCL20P78556 96 aa6.21□□□□□ -1.42
NUP50-206ENST00000422489 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.42
NUP50-206ENST00000422489 GNG13Q9P2W3 67 aa6.21□□□□□ -1.42
NUP50-206ENST00000422489 URGCP-MRPS24S4R325 110 aa6.21□□□□□ -1.42
NUP50-206ENST00000422489 TRAV8-3A0A0A6YYJ7 113 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 LECT2O14960 151 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 SMR3BP02814 79 aaPredicted RBP6.2□□□□□ -1.42
NUP50-206ENST00000422489 RPL36AP83881 106 aaKnown RBP6.2□□□□□ -1.42
NUP50-206ENST00000422489 TOR2AQ5JU69 321 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 SPANXN1Q5VSR9 72 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 Q8N814 137 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 RPL36ALQ969Q0 106 aaKnown RBP6.2□□□□□ -1.42
NUP50-206ENST00000422489 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
NUP50-206ENST00000422489 A0A087WX48 190 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 F5H697 171 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 HAMPP81172 84 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 ZNF56Q15929 161 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 KCNIP4Q6PIL6 250 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 OR10AG1Q8NH19 301 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 NTN5Q8WTR8 489 aaPredicted RBP6.19□□□□□ -1.42
NUP50-206ENST00000422489 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
NUP50-206ENST00000422489 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 TRBV7-3A0A075B6L6 115 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 TEX46H3BTG2 121 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 RPL35P42766 123 aaKnown RBP6.18□□□□□ -1.42
NUP50-206ENST00000422489 LAGE3Q14657 143 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 EIF5AL1Q6IS14 154 aaKnown RBP6.18□□□□□ -1.42
NUP50-206ENST00000422489 NIT1Q86X76 327 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 FRZBQ92765 325 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 UBE2WQ96B02 151 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 DAZAP1Q96EP5 407 aaKnown RBP6.18□□□□□ -1.42
NUP50-206ENST00000422489 TPPP3Q9BW30 176 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 KLK12Q9UKR0 248 aa6.18□□□□□ -1.42
NUP50-206ENST00000422489 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
NUP50-206ENST00000422489 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 TRBV10-1A0A0K0K1A3 114 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 RAB19A4D1S5 217 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 SMIM17P0DL12 118 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 RAB5CP51148 216 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 RAB4BP61018 213 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 UBE2D3P61077 147 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 UBE2D2P62837 147 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 WFDC2Q14508 124 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 ELOBQ15370 118 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.17□□□□□ -1.42
NUP50-206ENST00000422489 RMI2Q96E14 147 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 DNAJC30Q96LL9 226 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
NUP50-206ENST00000422489 RBFOX3A6NFN3 312 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 FAM229AH3BQW9 127 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 CXCL1P09341 107 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 GZMBP10144 247 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 CENPWQ5EE01 88 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 SSBP4Q9BWG4 385 aaPredicted RBP6.16□□□□□ -1.42
NUP50-206ENST00000422489 MED9Q9NWA0 146 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 COX11Q9Y6N1 276 aa6.16□□□□□ -1.42
NUP50-206ENST00000422489 TRAV1-1A0A0B4J248 108 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms