RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 C14orf178Q8N769 122 aaPredicted RBP15.36■□□□□ 0.05
ABCF3-202ENST00000421340 POM121L12Q8N7R1 296 aa15.36■□□□□ 0.05
ABCF3-202ENST00000421340 TRAPPC1Q9Y5R8 145 aa15.36■□□□□ 0.05
ABCF3-202ENST00000421340 MUC4Q99102 2169 aa15.35■□□□□ 0.05
ABCF3-202ENST00000421340 TRAV4A0A0B4J268 109 aa15.35■□□□□ 0.05
ABCF3-202ENST00000421340 JPT2Q9H910 190 aa15.35■□□□□ 0.05
ABCF3-202ENST00000421340 GAGE12BA1L429 117 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 RHODO00212 210 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 DEFB4AO15263 64 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 GAGE7O76087 117 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 APCSP02743 223 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 GAGE12FP0CL80 117 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 GAGE12GP0CL81 117 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 GAGE12IP0CL82 117 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 RAB4AP20338 218 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 LINC00315P59091 139 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 UFSP1Q6NVU6 142 aa15.34■□□□□ 0.05
ABCF3-202ENST00000421340 TRGV2A0A075B6R0 118 aa15.33■□□□□ 0.04
ABCF3-202ENST00000421340 OR4C5Q8NGB2 326 aa15.33■□□□□ 0.04
ABCF3-202ENST00000421340 RNF185Q96GF1 192 aa15.33■□□□□ 0.04
ABCF3-202ENST00000421340 MRPL18Q9H0U6 180 aaKnown RBP15.33■□□□□ 0.04
ABCF3-202ENST00000421340 NBEAL2Q6ZNJ1 2754 aa15.33■□□□□ 0.04
ABCF3-202ENST00000421340 AMN1Q8IY45 258 aa15.32■□□□□ 0.04
ABCF3-202ENST00000421340 SAMD10Q9BYL1 202 aa15.32■□□□□ 0.04
ABCF3-202ENST00000421340 A0A087WWL8 130 aa15.31■□□□□ 0.04
ABCF3-202ENST00000421340 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
ABCF3-202ENST00000421340 SLAQ13239 276 aa15.31■□□□□ 0.04
ABCF3-202ENST00000421340 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.31■□□□□ 0.04
ABCF3-202ENST00000421340 PPBPP02775 128 aa15.3■□□□□ 0.04
ABCF3-202ENST00000421340 DEFB130BP0DP73 79 aa15.3■□□□□ 0.04
ABCF3-202ENST00000421340 DEFB130AP0DP74 79 aa15.3■□□□□ 0.04
ABCF3-202ENST00000421340 MRPL51Q4U2R6 128 aaKnown RBP15.3■□□□□ 0.04
ABCF3-202ENST00000421340 MRAP2Q96G30 205 aa15.3■□□□□ 0.04
ABCF3-202ENST00000421340 A0A0J9YWU9 116 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 TRGC2P03986 189 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 DAD1P61803 113 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 EDA2RQ9HAV5 297 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 CELA1Q9UNI1 258 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 U3KQK5 164 aa15.29■□□□□ 0.04
ABCF3-202ENST00000421340 PHOX2AO14813 284 aa15.28■□□□□ 0.04
ABCF3-202ENST00000421340 FAM74A4Q5TZK3 123 aa15.28■□□□□ 0.04
ABCF3-202ENST00000421340 ZNF479Q96JC4 524 aa15.28■□□□□ 0.04
ABCF3-202ENST00000421340 F5H697 171 aa15.26■□□□□ 0.03
ABCF3-202ENST00000421340 MGPP08493 103 aa15.26■□□□□ 0.03
ABCF3-202ENST00000421340 MEGF8Q7Z7M0 2845 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 PPP1R17O96001 155 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 IGHV3-53P01767 116 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 CKS2P33552 79 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 ZNF56Q15929 161 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 C12orf74Q32Q52 190 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 ORMDL3Q8N138 153 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 LAMTOR2Q9Y2Q5 125 aa15.25■□□□□ 0.03
ABCF3-202ENST00000421340 H7C1H1 209 aa15.24■□□□□ 0.03
ABCF3-202ENST00000421340 ATP5G1P05496 136 aa15.24■□□□□ 0.03
ABCF3-202ENST00000421340 FHL2Q14192 279 aa15.24■□□□□ 0.03
ABCF3-202ENST00000421340 SUMO4Q6EEV6 95 aa15.24■□□□□ 0.03
ABCF3-202ENST00000421340 C11orf45Q8TAV5 145 aa15.24■□□□□ 0.03
ABCF3-202ENST00000421340 ALKBH7Q9BT30 221 aaPredicted RBP15.24■□□□□ 0.03
ABCF3-202ENST00000421340 IGHV3-73A0A0B4J1V6 119 aa15.23■□□□□ 0.03
ABCF3-202ENST00000421340 C1orf196B1AJZ1 125 aa15.23■□□□□ 0.03
ABCF3-202ENST00000421340 D6R8Y8 96 aa15.23■□□□□ 0.03
ABCF3-202ENST00000421340 M0QY20 66 aa15.23■□□□□ 0.03
ABCF3-202ENST00000421340 GATA1P15976 413 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-202ENST00000421340 KIAA1644Q3SXP7 199 aa15.23■□□□□ 0.03
ABCF3-202ENST00000421340 TRBV6-4A0A1B0GX49 114 aa15.22■□□□□ 0.03
ABCF3-202ENST00000421340 Q6ZSN1 163 aa15.22■□□□□ 0.03
ABCF3-202ENST00000421340 TRGV4A0A0C4DH28 118 aa15.21■□□□□ 0.03
ABCF3-202ENST00000421340 PRELID3AQ96N28 172 aa15.21■□□□□ 0.03
ABCF3-202ENST00000421340 TRAV26-2A0A0B4J265 109 aa15.2■□□□□ 0.02
ABCF3-202ENST00000421340 TRBV10-1A0A0K0K1A3 114 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 SRIP30626 198 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 NRACQ8N912 160 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 DNAJC30Q96LL9 226 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 NIT2Q9NQR4 276 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 HHLA3Q9XRX5 114 aa15.19■□□□□ 0.02
ABCF3-202ENST00000421340 TRBV6-5A0A0K0K1A5 114 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 PRSS47A8MTI9 375 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 SMKR1H3BMG3 65 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 GAS8-AS1O95177 125 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 TNFRSF6BO95407 300 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 HOXA5P20719 270 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 C20orf78Q9BR46 151 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 PRO0255Q9UI72 69 aa15.18■□□□□ 0.02
ABCF3-202ENST00000421340 K7EQD1 137 aa15.17■□□□□ 0.02
ABCF3-202ENST00000421340 NCR2O95944 276 aa15.17■□□□□ 0.02
ABCF3-202ENST00000421340 RAB5BP61020 215 aa15.17■□□□□ 0.02
ABCF3-202ENST00000421340 SLC25A29Q8N8R3 303 aa15.17■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BKO60814 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BJP06899 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BOP23527 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BBP33778 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 CRYBA4P53673 196 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BDP58876 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 NANOS2P60321 138 aaKnown RBP15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BCP62807 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 RHOHQ15669 191 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST2H2BEQ16778 126 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 OR10J3Q5JRS4 329 aa15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.16■□□□□ 0.02
ABCF3-202ENST00000421340 HIST1H2BHQ93079 126 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms