RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 ZNF815PA8K554 130 aa15.17■□□□□ 0.02
KRT3-201ENST00000417996 SYNJ2BPP57105 145 aa15.17■□□□□ 0.02
KRT3-201ENST00000417996 SNRPD3P62318 126 aaKnown RBP15.17■□□□□ 0.02
KRT3-201ENST00000417996 DUX5Q96PT3 197 aa15.17■□□□□ 0.02
KRT3-201ENST00000417996 KIR2DL4Q99706 377 aa15.17■□□□□ 0.02
KRT3-201ENST00000417996 IGHV3-16A0A0C4DH30 117 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 VCYO14598 125 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 C11orf86A6NJI1 115 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 GATA3P23771 443 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 RPL32P62910 135 aaKnown RBP15.16■□□□□ 0.02
KRT3-201ENST00000417996 SPINK13Q1W4C9 94 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 ZNF580Q9UK33 172 aa15.16■□□□□ 0.02
KRT3-201ENST00000417996 UTP20O75691 2785 aaKnown RBP15.16■□□□□ 0.02
KRT3-201ENST00000417996 IGIPA6NJ69 53 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 Q8N1Y9 231 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 KLHL30-AS1Q8NEE0 82 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 PLEKHB2Q96CS7 222 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 IGLV4-69A0A075B6H9 119 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 RPL24P83731 157 aaKnown RBP15.15■□□□□ 0.02
KRT3-201ENST00000417996 ZNF56Q15929 161 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 SCGB1D4Q6XE38 83 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 LINC01356Q8N9X3 169 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 C9orf85Q96MD7 179 aa15.15■□□□□ 0.02
KRT3-201ENST00000417996 ZNF256Q9Y2P7 627 aaPredicted RBP15.15■□□□□ 0.02
KRT3-201ENST00000417996 FLNCQ14315 2725 aa15.14■□□□□ 0.01
KRT3-201ENST00000417996 K7EQG2 157 aa15.14■□□□□ 0.01
KRT3-201ENST00000417996 LINC01619G3V211 115 aa15.14■□□□□ 0.01
KRT3-201ENST00000417996 FOXI2Q6ZQN5 318 aa15.14■□□□□ 0.01
KRT3-201ENST00000417996 LGALS9O00182 355 aa15.13■□□□□ 0.01
KRT3-201ENST00000417996 TGFAP01135 160 aa15.13■□□□□ 0.01
KRT3-201ENST00000417996 DSCR9P59020 149 aa15.13■□□□□ 0.01
KRT3-201ENST00000417996 PMVKQ15126 192 aa15.13■□□□□ 0.01
KRT3-201ENST00000417996 ODF3Q96PU9 254 aa15.12■□□□□ 0.01
KRT3-201ENST00000417996 COX6B1P14854 86 aa15.12■□□□□ 0.01
KRT3-201ENST00000417996 AMTNQ6UX39 209 aa15.12■□□□□ 0.01
KRT3-201ENST00000417996 IGHV1OR15-1A0A075B7D0 117 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 COTL1Q14019 142 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 RRN3P1Q2M238 152 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 SYT8Q8NBV8 401 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 DOPEY1Q5JWR5 2465 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 TRBV27A0A0K0K1C4 114 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 H3BMG7 143 aa15.11■□□□□ 0.01
KRT3-201ENST00000417996 MORN3Q6PF18 240 aaPredicted RBP15.11■□□□□ 0.01
KRT3-201ENST00000417996 USP9XQ93008 2570 aaPredicted RBP15.1■□□□□ 0.01
KRT3-201ENST00000417996 TMEM141Q96I45 108 aa15.1■□□□□ 0.01
KRT3-201ENST00000417996 TEX48A0A1B0GUV7 120 aa15.1■□□□□ 0.01
KRT3-201ENST00000417996 A0A1B0GWB2 263 aa15.1■□□□□ 0.01
KRT3-201ENST00000417996 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.01
KRT3-201ENST00000417996 USP24Q9UPU5 2620 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 TMEM89A2RUT3 159 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 M0QY20 66 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 HOXA3O43365 443 aaPredicted RBP15.09■□□□□ 0.01
KRT3-201ENST00000417996 HERVK_113P61574 105 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 TMEM170BQ5T4T1 132 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 TIMM17AQ99595 171 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 HOXD3P31249 432 aaPredicted RBP15.09■□□□□ 0.01
KRT3-201ENST00000417996 WFDC2Q14508 124 aa15.09■□□□□ 0.01
KRT3-201ENST00000417996 TRBV6-5A0A0K0K1A5 114 aa15.08■□□□□ 0
KRT3-201ENST00000417996 LINC01549A6NIU2 74 aa15.08■□□□□ 0
KRT3-201ENST00000417996 PAPPA-AS1Q5QFB9 102 aa15.08■□□□□ 0
KRT3-201ENST00000417996 MTURNQ8N3F0 131 aa15.08■□□□□ 0
KRT3-201ENST00000417996 OPRPNQ99935 248 aaPredicted RBP15.08■□□□□ 0
KRT3-201ENST00000417996 ZNRF2Q8NHG8 242 aa15.08■□□□□ 0
KRT3-201ENST00000417996 DOPEY2Q9Y3R5 2298 aa15.07■□□□□ 0
KRT3-201ENST00000417996 A0A096LNT2 108 aa15.07■□□□□ 0
KRT3-201ENST00000417996 ZNF876PQ49A33 203 aa15.07■□□□□ 0
KRT3-201ENST00000417996 VPREB3Q9UKI3 123 aa15.07■□□□□ 0
KRT3-201ENST00000417996 PGPEP1Q9NXJ5 209 aa15.06■□□□□ 0
KRT3-201ENST00000417996 IGSF10Q6WRI0 2623 aa15.06■□□□□ 0
KRT3-201ENST00000417996 HTN1P15515 57 aa15.06■□□□□ 0
KRT3-201ENST00000417996 TSPEAR-AS2P59090 65 aa15.06■□□□□ 0
KRT3-201ENST00000417996 F8W1H4 67 aa15.05■□□□□ 0
KRT3-201ENST00000417996 TRPT1Q86TN4 253 aaKnown RBP15.05■□□□□ -0
KRT3-201ENST00000417996 ZNF702PQ9H963 129 aa15.05■□□□□ -0
KRT3-201ENST00000417996 MRPL16Q9NX20 251 aaKnown RBP15.05■□□□□ -0
KRT3-201ENST00000417996 SORL1Q92673 2214 aa15.05■□□□□ -0
KRT3-201ENST00000417996 KNCNA6PVL3 124 aa15.04■□□□□ -0
KRT3-201ENST00000417996 J3QLI3 93 aa15.04■□□□□ -0
KRT3-201ENST00000417996 BEX4Q9NWD9 120 aaPredicted RBP15.04■□□□□ -0
KRT3-201ENST00000417996 TMEM238LA0A1B0GVL6 79 aa15.04■□□□□ -0
KRT3-201ENST00000417996 A6NJY4 79 aa15.04■□□□□ -0
KRT3-201ENST00000417996 DEFB136Q30KP8 78 aa15.04■□□□□ -0
KRT3-201ENST00000417996 TCTEX1D4Q5JR98 221 aa15.04■□□□□ -0
KRT3-201ENST00000417996 ZFYVE26Q68DK2 2539 aa15.04■□□□□ -0
KRT3-201ENST00000417996 A0A0J9YY99 117 aa15.03■□□□□ -0
KRT3-201ENST00000417996 ELANEP08246 267 aa15.03■□□□□ -0
KRT3-201ENST00000417996 RBMY1A1P0DJD3 496 aaKnown RBP15.03■□□□□ -0
KRT3-201ENST00000417996 RBMY1CP0DJD4 496 aa15.03■□□□□ -0
KRT3-201ENST00000417996 RBMY1FQ15415 496 aaKnown RBP15.03■□□□□ -0
KRT3-201ENST00000417996 SFTA2Q6UW10 78 aa15.03■□□□□ -0
KRT3-201ENST00000417996 C18orf65Q6ZTR6 163 aa15.03■□□□□ -0
KRT3-201ENST00000417996 ZANQ9Y493 2812 aa15.03■□□□□ -0
KRT3-201ENST00000417996 P0DMU3 169 aa15.03■□□□□ -0
KRT3-201ENST00000417996 FAM231AP0DMU4 169 aa15.03■□□□□ -0
KRT3-201ENST00000417996 FAM231CP0DMU5 169 aa15.03■□□□□ -0
KRT3-201ENST00000417996 IGHV3-73A0A0B4J1V6 119 aa15.02■□□□□ -0
KRT3-201ENST00000417996 SLURP1P55000 103 aa15.02■□□□□ -0
KRT3-201ENST00000417996 NSUN5P1Q3KNT7 163 aa15.02■□□□□ -0
KRT3-201ENST00000417996 GAGE13Q4V321 117 aa15.02■□□□□ -0
KRT3-201ENST00000417996 SH2D6Q7Z4S9 175 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms