RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 LINC01587Q99440 93 aa13.23□□□□□ -0.29
RTN4R-202ENST00000416372 TMEM70Q9BUB7 260 aa13.23□□□□□ -0.29
RTN4R-202ENST00000416372 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 PPBPP02775 128 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 NCR2O95944 276 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 LINC00614P0C842 121 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 AP1S3Q96PC3 154 aa13.22□□□□□ -0.29
RTN4R-202ENST00000416372 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
RTN4R-202ENST00000416372 HNRNPA3P51991 378 aaKnown RBP13.21□□□□□ -0.29
RTN4R-202ENST00000416372 COL5A1-AS1Q5SY13 56 aa13.21□□□□□ -0.29
RTN4R-202ENST00000416372 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
RTN4R-202ENST00000416372 MUC4Q99102 2169 aa13.21□□□□□ -0.3
RTN4R-202ENST00000416372 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 Q6ZN92 141 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 C14orf178Q8N769 122 aaPredicted RBP13.2□□□□□ -0.3
RTN4R-202ENST00000416372 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
RTN4R-202ENST00000416372 VWFP04275 2813 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 GAGE1Q13065 139 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 DEFB125Q8N687 156 aa13.2□□□□□ -0.3
RTN4R-202ENST00000416372 NPYP01303 97 aa13.19□□□□□ -0.3
RTN4R-202ENST00000416372 C12orf54Q6X4T0 127 aa13.19□□□□□ -0.3
RTN4R-202ENST00000416372 PRSS3P2Q8NHM4 247 aa13.19□□□□□ -0.3
RTN4R-202ENST00000416372 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
RTN4R-202ENST00000416372 PRM2P04554 102 aa13.18□□□□□ -0.3
RTN4R-202ENST00000416372 SMIM17P0DL12 118 aa13.18□□□□□ -0.3
RTN4R-202ENST00000416372 IGLL1P15814 213 aa13.18□□□□□ -0.3
RTN4R-202ENST00000416372 C1orf158Q8N1D5 194 aa13.18□□□□□ -0.3
RTN4R-202ENST00000416372 IGHV3OR16-12A0A075B7B8 117 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 LOC389332A0A1B0GUA5 103 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 GAS8-AS1O95177 125 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 MGPP08493 103 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 ZNF25P17030 456 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-202ENST00000416372 ZNF415Q09FC8 603 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 MORN3Q6PF18 240 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-202ENST00000416372 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-202ENST00000416372 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 FA2HQ7L5A8 372 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 ATOH7Q8N100 152 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 HSPB8Q9UJY1 196 aa13.17□□□□□ -0.3
RTN4R-202ENST00000416372 TRAV26-2A0A0B4J265 109 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 DLEU1O43261 78 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 TNFRSF6BO95407 300 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 ZNF876PQ49A33 203 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 C1QTNF4Q9BXJ3 329 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 JPT2Q9H910 190 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
RTN4R-202ENST00000416372 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
RTN4R-202ENST00000416372 G0S2P27469 103 aa13.15□□□□□ -0.3
RTN4R-202ENST00000416372 IFI27P40305 119 aaPredicted RBP13.15□□□□□ -0.3
RTN4R-202ENST00000416372 BATFQ16520 125 aa13.15□□□□□ -0.3
RTN4R-202ENST00000416372 MAP1LC3AQ9H492 121 aa13.15□□□□□ -0.3
RTN4R-202ENST00000416372 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.31
RTN4R-202ENST00000416372 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.31
RTN4R-202ENST00000416372 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.31
RTN4R-202ENST00000416372 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.31
RTN4R-202ENST00000416372 A0A087WWL8 130 aa13.14□□□□□ -0.31
RTN4R-202ENST00000416372 MAJINQ3KP22 176 aa13.14□□□□□ -0.31
RTN4R-202ENST00000416372 AP5S1Q9NUS5 200 aa13.14□□□□□ -0.31
RTN4R-202ENST00000416372 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
RTN4R-202ENST00000416372 M0R2P5 195 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 WIPF1O43516 503 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 AZU1P20160 251 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 KRTAP21-3Q3LHN1 58 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 NRACQ8N912 160 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 C11orf72Q8NBR9 251 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 LINC00315P59091 139 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 FAM74A4Q5TZK3 123 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 POM121L12Q8N7R1 296 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 SPXQ9BT56 116 aa13.12□□□□□ -0.31
RTN4R-202ENST00000416372 F5H697 171 aa13.11□□□□□ -0.31
RTN4R-202ENST00000416372 LINC00173Q6ZV60 143 aa13.11□□□□□ -0.31
RTN4R-202ENST00000416372 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
RTN4R-202ENST00000416372 STPG4Q8N801 248 aa13.1□□□□□ -0.31
RTN4R-202ENST00000416372 NXT2Q9NPJ8 142 aaKnown RBP13.1□□□□□ -0.31
RTN4R-202ENST00000416372 HSBP1L1C9JCN9 74 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 CRYGDP07320 174 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 CSNK1G2-AS1Q8NCQ2 148 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 RASL10AQ92737 203 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 PTH2Q96A98 100 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 PIK3CD-AS1Q5SR53 167 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 LINC01545Q5VT33 79 aa13.09□□□□□ -0.31
RTN4R-202ENST00000416372 PPP1R17O96001 155 aa13.08□□□□□ -0.32
RTN4R-202ENST00000416372 ZNF56Q15929 161 aa13.08□□□□□ -0.32
RTN4R-202ENST00000416372 SUMO4Q6EEV6 95 aa13.08□□□□□ -0.32
RTN4R-202ENST00000416372 Q8N8P6 123 aa13.08□□□□□ -0.32
RTN4R-202ENST00000416372 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
RTN4R-202ENST00000416372 RPL39LQ96EH5 51 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms