RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 Q9HAA7 133 aa16.8■□□□□ 0.28
HLA-C-204ENST00000415537 SCRT2Q9NQ03 307 aa16.8■□□□□ 0.28
HLA-C-204ENST00000415537 APOBP04114 4563 aaKnown RBP16.79■□□□□ 0.28
HLA-C-204ENST00000415537 M0R381 172 aa16.78■□□□□ 0.28
HLA-C-204ENST00000415537 H2AFB1P0C5Y9 115 aa16.78■□□□□ 0.28
HLA-C-204ENST00000415537 C14orf178Q8N769 122 aaPredicted RBP16.78■□□□□ 0.28
HLA-C-204ENST00000415537 ABCA13Q86UQ4 5058 aa16.77■□□□□ 0.28
HLA-C-204ENST00000415537 SFRP2Q96HF1 295 aa16.77■□□□□ 0.28
HLA-C-204ENST00000415537 A0A087WWL8 130 aa16.76■□□□□ 0.27
HLA-C-204ENST00000415537 SCO2A0A1W2PP80 73 aa16.76■□□□□ 0.27
HLA-C-204ENST00000415537 LINC00694P0DN24 101 aa16.76■□□□□ 0.27
HLA-C-204ENST00000415537 ZFP82Q8N141 532 aa16.76■□□□□ 0.27
HLA-C-204ENST00000415537 A0A087WWC5 75 aa16.75■□□□□ 0.27
HLA-C-204ENST00000415537 TMUB2Q71RG4 321 aa16.75■□□□□ 0.27
HLA-C-204ENST00000415537 BAGE2Q86Y30 109 aa16.75■□□□□ 0.27
HLA-C-204ENST00000415537 Q9UF83 564 aa16.75■□□□□ 0.27
HLA-C-204ENST00000415537 LAGE3Q14657 143 aa16.74■□□□□ 0.27
HLA-C-204ENST00000415537 GCSHP23434 173 aa16.72■□□□□ 0.27
HLA-C-204ENST00000415537 TM2D2Q9BX73 214 aa16.72■□□□□ 0.27
HLA-C-204ENST00000415537 LRCOL1A6NCL2 159 aa16.71■□□□□ 0.27
HLA-C-204ENST00000415537 KRTAP10-1P60331 282 aa16.7■□□□□ 0.26
HLA-C-204ENST00000415537 TOR2AQ5JU69 321 aa16.7■□□□□ 0.26
HLA-C-204ENST00000415537 PRR27Q6MZM9 219 aa16.7■□□□□ 0.26
HLA-C-204ENST00000415537 MLST8Q9BVC4 326 aa16.7■□□□□ 0.26
HLA-C-204ENST00000415537 URGCP-MRPS24S4R325 110 aa16.7■□□□□ 0.26
HLA-C-204ENST00000415537 IGLV5-52A0A0A0MRZ9 124 aa16.69■□□□□ 0.26
HLA-C-204ENST00000415537 RPL19P84098 196 aaKnown RBP16.69■□□□□ 0.26
HLA-C-204ENST00000415537 Q8N3U1 123 aa16.69■□□□□ 0.26
HLA-C-204ENST00000415537 NTN5Q8WTR8 489 aaPredicted RBP16.69■□□□□ 0.26
HLA-C-204ENST00000415537 MANBALQ9NQG1 85 aa16.69■□□□□ 0.26
HLA-C-204ENST00000415537 TRAV8-3A0A0A6YYJ7 113 aa16.68■□□□□ 0.26
HLA-C-204ENST00000415537 TRBV10-1A0A0K0K1A3 114 aa16.68■□□□□ 0.26
HLA-C-204ENST00000415537 CXCL1P09341 107 aa16.68■□□□□ 0.26
HLA-C-204ENST00000415537 RPL36AP83881 106 aaKnown RBP16.68■□□□□ 0.26
HLA-C-204ENST00000415537 EIF5AL1Q6IS14 154 aaKnown RBP16.68■□□□□ 0.26
HLA-C-204ENST00000415537 DAZ4Q86SG3 579 aaKnown RBP16.68■□□□□ 0.26
HLA-C-204ENST00000415537 RPL36ALQ969Q0 106 aaKnown RBP16.68■□□□□ 0.26
HLA-C-204ENST00000415537 DAZ3Q9NR90 486 aaKnown RBP16.68■□□□□ 0.26
HLA-C-204ENST00000415537 GNG13Q9P2W3 67 aa16.68■□□□□ 0.26
HLA-C-204ENST00000415537 TEX46H3BTG2 121 aa16.67■□□□□ 0.26
HLA-C-204ENST00000415537 RAB5CP51148 216 aa16.67■□□□□ 0.26
HLA-C-204ENST00000415537 XGP55808 180 aa16.67■□□□□ 0.26
HLA-C-204ENST00000415537 Q8N814 137 aa16.67■□□□□ 0.26
HLA-C-204ENST00000415537 EPM2AB3EWF7 344 aa16.66■□□□□ 0.26
HLA-C-204ENST00000415537 RPL35P42766 123 aaKnown RBP16.66■□□□□ 0.26
HLA-C-204ENST00000415537 TRBV7-3A0A075B6L6 115 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 RAB4BP61018 213 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 CCL20P78556 96 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 ZNF56Q15929 161 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 SPANXN1Q5VSR9 72 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 OR10AG1Q8NH19 301 aa16.65■□□□□ 0.26
HLA-C-204ENST00000415537 KCNIP4Q6PIL6 250 aa16.64■□□□□ 0.25
HLA-C-204ENST00000415537 TRAV1-1A0A0B4J248 108 aa16.63■□□□□ 0.25
HLA-C-204ENST00000415537 SNAI2O43623 268 aa16.63■□□□□ 0.25
HLA-C-204ENST00000415537 NIT1Q86X76 327 aa16.63■□□□□ 0.25
HLA-C-204ENST00000415537 OR5AL1P0C617 328 aa16.62■□□□□ 0.25
HLA-C-204ENST00000415537 UBE2D3P61077 147 aa16.62■□□□□ 0.25
HLA-C-204ENST00000415537 UBE2D2P62837 147 aa16.62■□□□□ 0.25
HLA-C-204ENST00000415537 DERL1Q9BUN8 251 aa16.62■□□□□ 0.25
HLA-C-204ENST00000415537 SSBP4Q9BWG4 385 aaPredicted RBP16.62■□□□□ 0.25
HLA-C-204ENST00000415537 COX11Q9Y6N1 276 aa16.62■□□□□ 0.25
HLA-C-204ENST00000415537 A0A087WX48 190 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 MUC21A0A0G2JKD1 596 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 MUC21A0A140T8X8 626 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 SSTP61278 116 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 C11orf52Q96A22 123 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 RMI2Q96E14 147 aa16.61■□□□□ 0.25
HLA-C-204ENST00000415537 SULT1A2P50226 295 aa16.6■□□□□ 0.25
HLA-C-204ENST00000415537 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.6■□□□□ 0.25
HLA-C-204ENST00000415537 OR10G8Q8NGN5 311 aa16.6■□□□□ 0.25
HLA-C-204ENST00000415537 DAZAP1Q96EP5 407 aaKnown RBP16.6■□□□□ 0.25
HLA-C-204ENST00000415537 F5H697 171 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 SMIM17P0DL12 118 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 ELOBQ15370 118 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 CENPWQ5EE01 88 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 TCTE3Q8IZS6 198 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 FRZBQ92765 325 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 CHCHD7Q9BUK0 85 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 KLK12Q9UKR0 248 aa16.59■□□□□ 0.25
HLA-C-204ENST00000415537 IFNA1P01562 189 aa16.58■□□□□ 0.24
HLA-C-204ENST00000415537 NEXN-AS1Q8NBZ9 246 aa16.57■□□□□ 0.24
HLA-C-204ENST00000415537 TMEM70Q9BUB7 260 aa16.57■□□□□ 0.24
HLA-C-204ENST00000415537 TMEM262E9PQX1 116 aa16.56■□□□□ 0.24
HLA-C-204ENST00000415537 LECT2O14960 151 aa16.56■□□□□ 0.24
HLA-C-204ENST00000415537 PDE6DO43924 150 aa16.56■□□□□ 0.24
HLA-C-204ENST00000415537 GNG4P50150 75 aa16.56■□□□□ 0.24
HLA-C-204ENST00000415537 MEF2BQ02080 365 aaPredicted RBP16.56■□□□□ 0.24
HLA-C-204ENST00000415537 TPPP3Q9BW30 176 aa16.56■□□□□ 0.24
HLA-C-204ENST00000415537 IGKV2D-24A0A075B6R9 120 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 RPS20P60866 119 aaKnown RBP16.55■□□□□ 0.24
HLA-C-204ENST00000415537 WFDC2Q14508 124 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 SLC51BQ86UW2 128 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 UBE2WQ96B02 151 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 SMIM12Q96EX1 92 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 AP1S3Q96PC3 154 aa16.55■□□□□ 0.24
HLA-C-204ENST00000415537 TRBV6-8A0A0A6YYG3 113 aa16.54■□□□□ 0.24
HLA-C-204ENST00000415537 Q5VSD8 79 aa16.54■□□□□ 0.24
HLA-C-204ENST00000415537 OR2D3Q8NGH3 330 aa16.54■□□□□ 0.24
HLA-C-204ENST00000415537 BAALCQ8WXS3 180 aa16.54■□□□□ 0.24
HLA-C-204ENST00000415537 MED9Q9NWA0 146 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms