RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
TOM1-204ENST00000411850 TP53TG1Q9Y2A0 90 aa12.59□□□□□ -0.39
TOM1-204ENST00000411850 TRBV6-5A0A0K0K1A5 114 aa12.58□□□□□ -0.4
TOM1-204ENST00000411850 LGALS9O00182 355 aa12.58□□□□□ -0.4
TOM1-204ENST00000411850 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
TOM1-204ENST00000411850 KIR2DL4Q99706 377 aa12.58□□□□□ -0.4
TOM1-204ENST00000411850 IGLV4-69A0A075B6H9 119 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 A0A087WWL8 130 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 IGHV3-16A0A0C4DH30 117 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 RIPPLY3P57055 190 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 WFDC12Q8WWY7 111 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 CELSR2Q9HCU4 2923 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 A0A0J9YX75 114 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 IGHV4-59P01825 116 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 PMVKQ15126 192 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 TIMM17AQ99595 171 aa12.57□□□□□ -0.4
TOM1-204ENST00000411850 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 F5H697 171 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
TOM1-204ENST00000411850 AGRNO00468 2067 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 C11orf86A6NJI1 115 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 F8W1H4 67 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 K7EQG2 157 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
TOM1-204ENST00000411850 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
TOM1-204ENST00000411850 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
TOM1-204ENST00000411850 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
TOM1-204ENST00000411850 FBN2P35556 2912 aa12.55□□□□□ -0.4
TOM1-204ENST00000411850 A0A096LNT2 108 aa12.54□□□□□ -0.4
TOM1-204ENST00000411850 HERVK_113P61574 105 aa12.54□□□□□ -0.4
TOM1-204ENST00000411850 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
TOM1-204ENST00000411850 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
TOM1-204ENST00000411850 RPL39P62891 51 aaKnown RBP12.54□□□□□ -0.4
TOM1-204ENST00000411850 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
TOM1-204ENST00000411850 CD300EQ496F6 205 aaPredicted RBP12.54□□□□□ -0.4
TOM1-204ENST00000411850 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
TOM1-204ENST00000411850 TEX48A0A1B0GUV7 120 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 A6NJY4 79 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 M0QY20 66 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 SCGB1D4Q6XE38 83 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 Q8N1Y9 231 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.4
TOM1-204ENST00000411850 TRAV12-2A0A075B6T6 113 aa12.52□□□□□ -0.41
TOM1-204ENST00000411850 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
TOM1-204ENST00000411850 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.41
TOM1-204ENST00000411850 RNF152Q8N8N0 203 aa12.52□□□□□ -0.41
TOM1-204ENST00000411850 ZNF876PQ49A33 203 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 H3BMG7 143 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
TOM1-204ENST00000411850 J3QLI3 93 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 UBE2D1P51668 147 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 WFDC2Q14508 124 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 RHOHQ15669 191 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 NSUN5P1Q3KNT7 163 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
TOM1-204ENST00000411850 EMP1P54849 157 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 SRSF9Q13242 221 aaKnown RBP eCLIP12.5□□□□□ -0.41
TOM1-204ENST00000411850 ZNF56Q15929 161 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
TOM1-204ENST00000411850 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
TOM1-204ENST00000411850 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 A0A0J9YY99 117 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
TOM1-204ENST00000411850 ZNF256Q9Y2P7 627 aaPredicted RBP12.49□□□□□ -0.41
TOM1-204ENST00000411850 FAM208BQ5VWN6 2430 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 ELANEP08246 267 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 GAGE13Q4V321 117 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 PRO0461Q9UI25 63 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.419e-7■■■□□ 16.8
TOM1-204ENST00000411850 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
TOM1-204ENST00000411850 CSMD2Q7Z408 3487 aa12.47□□□□□ -0.41
TOM1-204ENST00000411850 MAP1AP78559 2803 aaPredicted RBP12.47□□□□□ -0.41
TOM1-204ENST00000411850 TMEM170BQ5T4T1 132 aa12.47□□□□□ -0.41
TOM1-204ENST00000411850 MRPL16Q9NX20 251 aaKnown RBP12.47□□□□□ -0.41
TOM1-204ENST00000411850 VPREB3Q9UKI3 123 aa12.47□□□□□ -0.41
TOM1-204ENST00000411850 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
TOM1-204ENST00000411850 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
TOM1-204ENST00000411850 UBE2E2Q96LR5 201 aa12.46□□□□□ -0.41
TOM1-204ENST00000411850 P0DMU3 169 aa12.45□□□□□ -0.42
TOM1-204ENST00000411850 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
TOM1-204ENST00000411850 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
TOM1-204ENST00000411850 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
TOM1-204ENST00000411850 BEX4Q9NWD9 120 aaPredicted RBP12.45□□□□□ -0.42
TOM1-204ENST00000411850 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
TOM1-204ENST00000411850 AMELXQ99217 191 aa12.45□□□□□ -0.42
TOM1-204ENST00000411850 ANKRD17O75179 2603 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms