RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CRXO43186 299 aaPredicted RBP4.07□□□□□ -1.76
EPHA4-202ENST00000409854 APCSP02743 223 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 Q6ZN92 141 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 SCRT2Q9NQ03 307 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 C19orf73Q9NVV2 129 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 A6NDN8 102 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 CAMPP49913 170 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 INSL3P51460 131 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 SMAGPQ0VAQ4 97 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 Q0VG73 95 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 ANXA2RQ3ZCQ2 193 aa4.07□□□□□ -1.76
EPHA4-202ENST00000409854 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
EPHA4-202ENST00000409854 M0R2Z0 102 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 SPINK13Q1W4C9 94 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 TRPT1Q86TN4 253 aaKnown RBP4.06□□□□□ -1.76
EPHA4-202ENST00000409854 SMIM20Q8N5G0 67 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 KCNS1Q96KK3 526 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 TP53TG3Q9ULZ0 132 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 LOC102724200A0A096LPH7 203 aaPredicted RBP4.06□□□□□ -1.76
EPHA4-202ENST00000409854 NXPH4O95158 308 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 CACNG7P62955 275 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 OR10J3Q5JRS4 329 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 PRIMA1Q86XR5 153 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 ZNF747Q9BV97 191 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 MUC4Q99102 2169 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 WNK1Q9H4A3 2382 aa4.06□□□□□ -1.76
EPHA4-202ENST00000409854 TRAV12-3A0A0B4J271 114 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 RBMY1A1P0DJD3 496 aaKnown RBP4.05□□□□□ -1.76
EPHA4-202ENST00000409854 RBMY1CP0DJD4 496 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
EPHA4-202ENST00000409854 NTF3P20783 257 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 ASIPP42127 132 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 AMTP48728 403 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 LINC00310P59036 64 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 RBMY1FQ15415 496 aaKnown RBP4.05□□□□□ -1.76
EPHA4-202ENST00000409854 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 SPATA3Q8NHX4 192 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 LINC00467Q9BRT7 94 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 TMEM191AQ9H0A3 160 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 CYSLTR1Q9Y271 337 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 TRAV12-2A0A075B6T6 113 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.05□□□□□ -1.76
EPHA4-202ENST00000409854 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 SRIP30626 198 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 KIAA1644Q3SXP7 199 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 MUC21Q5SSG8 566 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 FAM159AQ6UWV7 190 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 WFDC9Q8NEX5 89 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 OR10AG1Q8NH19 301 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 SPANXDQ9BXN6 97 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 SAMD10Q9BYL1 202 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 U3KQK5 164 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 FLNBO75369 2602 aaKnown RBP4.05□□□□□ -1.76
EPHA4-202ENST00000409854 H3BVH4 76 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 SEC11AP67812 179 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 FAM104BQ5XKR9 115 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 C18orf32Q8TCD1 76 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 C9orf85Q96MD7 179 aa4.05□□□□□ -1.76
EPHA4-202ENST00000409854 IGHV1OR15-1A0A075B7D0 117 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 SMIM9A6NGZ8 99 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 GNRH2O43555 120 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 CD7P09564 240 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 TWIST1Q15672 202 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 SPATA45Q537H7 98 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 DNAJC30Q96LL9 226 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 SORL1Q92673 2214 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 K7EP34 96 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 ZFAND6Q6FIF0 208 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 STHQ8IWL8 128 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 MCRIP2Q9BUT9 160 aaKnown RBP4.04□□□□□ -1.76
EPHA4-202ENST00000409854 C1QTNF4Q9BXJ3 329 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 GTSF1LQ9H1H1 148 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 FXYD7P58549 80 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 TMEM97Q5BJF2 176 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 OR13C6PQ8NH95 151 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 RCHY1Q96PM5 261 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 PAM16Q9Y3D7 125 aa4.04□□□□□ -1.76
EPHA4-202ENST00000409854 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 A0A087WX48 190 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 INSP01308 110 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 EVI2AP22794 236 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 MRPL51Q4U2R6 128 aaKnown RBP4.03□□□□□ -1.76
EPHA4-202ENST00000409854 AMMECR1LQ6DCA0 310 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 Q8N1Y9 231 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 TMEM256Q8N2U0 113 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 PMCHL2Q9BQD1 86 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 MAP1LC3CQ9BXW4 147 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 TENM1Q9UKZ4 2725 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 NUPR1O60356 82 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 SERF1AO75920 110 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms