RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RPS20P60866 119 aaKnown RBP21.34■■□□□ 1.01
TRAF3IP1-203ENST00000409739 TTC32Q5I0X7 151 aa21.34■■□□□ 1.01
TRAF3IP1-203ENST00000409739 OCC1Q8TAD7 63 aa21.34■■□□□ 1.01
TRAF3IP1-203ENST00000409739 MUC21A0A0G2JKD1 596 aa21.33■■□□□ 1.01
TRAF3IP1-203ENST00000409739 MUC21A0A140T8X8 626 aa21.33■■□□□ 1.01
TRAF3IP1-203ENST00000409739 NDUFS6O75380 124 aaKnown RBP21.33■■□□□ 1.01
TRAF3IP1-203ENST00000409739 C14orf178Q8N769 122 aaPredicted RBP21.33■■□□□ 1.01
TRAF3IP1-203ENST00000409739 IGLC6P0CF74 106 aa21.32■■□□□ 1
TRAF3IP1-203ENST00000409739 CEBPGP53567 150 aa21.32■■□□□ 1
TRAF3IP1-203ENST00000409739 SOHLH1Q5JUK2 328 aa21.32■■□□□ 1
TRAF3IP1-203ENST00000409739 SPANXN1Q5VSR9 72 aa21.31■■□□□ 1
TRAF3IP1-203ENST00000409739 A0A1W2PPQ1 181 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 LINC00694P0DN24 101 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 TIRAPP58753 221 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 FER1L6-AS1Q8NA97 138 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 NUDT10Q8NFP7 164 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 NUDT11Q96G61 164 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 Q9UF83 564 aa21.3■■□□□ 1
TRAF3IP1-203ENST00000409739 WFDC10BQ8IUB3 73 aa21.29■■□□□ 1
TRAF3IP1-203ENST00000409739 C6orf223Q8N319 242 aa21.29■■□□□ 1
TRAF3IP1-203ENST00000409739 HECTD4Q9Y4D8 3996 aa21.29■■□□□ 1
TRAF3IP1-203ENST00000409739 XKRY2A2RUG3 117 aa21.28■■□□□ 1
TRAF3IP1-203ENST00000409739 PRSS29PA6NIE9 313 aa21.28■■□□□ 1
TRAF3IP1-203ENST00000409739 SRP19P09132 144 aaKnown RBP21.28■■□□□ 1
TRAF3IP1-203ENST00000409739 TPPP3Q9BW30 176 aa21.28■■□□□ 1
TRAF3IP1-203ENST00000409739 RNASE7Q9H1E1 156 aaKnown RBP21.28■■□□□ 1
TRAF3IP1-203ENST00000409739 GAGE12JA6NER3 117 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 SSTP61278 116 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 GAGE1Q13065 139 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 GAGE4Q13068 117 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 GAGE5Q13069 117 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 GAGE13Q4V321 117 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 SMIM7Q9BQ49 75 aa21.27■■□□□ 1
TRAF3IP1-203ENST00000409739 ATP6V0E2Q8NHE4 81 aa21.26■□□□□ 0.99
TRAF3IP1-203ENST00000409739 RPP21Q9H633 154 aaKnown RBP21.26■□□□□ 0.99
TRAF3IP1-203ENST00000409739 LY96Q9Y6Y9 160 aa21.24■□□□□ 0.99
TRAF3IP1-203ENST00000409739 AP1S3Q96PC3 154 aa21.23■□□□□ 0.99
TRAF3IP1-203ENST00000409739 GTSF1LQ9H1H1 148 aa21.23■□□□□ 0.99
TRAF3IP1-203ENST00000409739 ZNF56Q15929 161 aa21.22■□□□□ 0.99
TRAF3IP1-203ENST00000409739 A0A1B0GVY2 172 aa21.21■□□□□ 0.99
TRAF3IP1-203ENST00000409739 ZNF727A8MUV8 499 aa21.21■□□□□ 0.99
TRAF3IP1-203ENST00000409739 F2Z2F3 143 aa21.21■□□□□ 0.99
TRAF3IP1-203ENST00000409739 RAB4BP61018 213 aa21.21■□□□□ 0.99
TRAF3IP1-203ENST00000409739 CACNG7P62955 275 aa21.21■□□□□ 0.99
TRAF3IP1-203ENST00000409739 DNAH10OSP0CZ25 163 aa21.2■□□□□ 0.98
TRAF3IP1-203ENST00000409739 CTRLP40313 264 aa21.2■□□□□ 0.98
TRAF3IP1-203ENST00000409739 LYZL1Q6UWQ5 148 aa21.2■□□□□ 0.98
TRAF3IP1-203ENST00000409739 MSRB1Q9NZV6 116 aa21.2■□□□□ 0.98
TRAF3IP1-203ENST00000409739 KIF25-AS1Q9Y6Z4 181 aa21.2■□□□□ 0.98
TRAF3IP1-203ENST00000409739 TRBV10-1A0A0K0K1A3 114 aa21.19■□□□□ 0.98
TRAF3IP1-203ENST00000409739 LELP1Q5T871 98 aa21.19■□□□□ 0.98
TRAF3IP1-203ENST00000409739 FAM231DQ6ZW35 169 aa21.19■□□□□ 0.98
TRAF3IP1-203ENST00000409739 LINC01551Q86U37 167 aa21.19■□□□□ 0.98
TRAF3IP1-203ENST00000409739 BIRC6Q9NR09 4857 aa21.19■□□□□ 0.98
TRAF3IP1-203ENST00000409739 C9JQL5 133 aa21.18■□□□□ 0.98
TRAF3IP1-203ENST00000409739 LINC00315P59091 139 aa21.18■□□□□ 0.98
TRAF3IP1-203ENST00000409739 SMIM17P0DL12 118 aa21.17■□□□□ 0.98
TRAF3IP1-203ENST00000409739 BTF3P20290 206 aaKnown RBP21.17■□□□□ 0.98
TRAF3IP1-203ENST00000409739 SRSF3P84103 164 aaKnown RBP21.17■□□□□ 0.98
TRAF3IP1-203ENST00000409739 OR10J3Q5JRS4 329 aa21.17■□□□□ 0.98
TRAF3IP1-203ENST00000409739 TRAV8-6A0A0B4J262 113 aa21.16■□□□□ 0.98
TRAF3IP1-203ENST00000409739 GATCO43716 136 aaKnown RBP21.16■□□□□ 0.98
TRAF3IP1-203ENST00000409739 PKD1P98161 4303 aa21.15■□□□□ 0.98
TRAF3IP1-203ENST00000409739 IGHV3-38A0A0C4DH36 116 aa21.15■□□□□ 0.98
TRAF3IP1-203ENST00000409739 EVI2AP22794 236 aa21.15■□□□□ 0.98
TRAF3IP1-203ENST00000409739 ERVFC1-1P60608 527 aa21.15■□□□□ 0.98
TRAF3IP1-203ENST00000409739 TNP2Q05952 138 aa21.15■□□□□ 0.98
TRAF3IP1-203ENST00000409739 F5H697 171 aa21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 RPL36AP83881 106 aaKnown RBP21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 PEA15Q15121 130 aa21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 OR10G8Q8NGN5 311 aa21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 GTSF1Q8WW33 167 aa21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 RPL36ALQ969Q0 106 aaKnown RBP21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 CNFNQ9BYD5 112 aa21.14■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TRBV7-3A0A075B6L6 115 aa21.13■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TRAV9-2A0A087WT02 112 aa21.13■□□□□ 0.97
TRAF3IP1-203ENST00000409739 NEXN-AS1Q8NBZ9 246 aa21.13■□□□□ 0.97
TRAF3IP1-203ENST00000409739 K7EP13 123 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 NTF3P20783 257 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 UBE2D3P61077 147 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 UBE2D2P62837 147 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 FAM74A3Q4VXF1 159 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 LINC01556Q5JQF7 62 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 WDR73Q6P4I2 378 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 SMDT1Q9H4I9 107 aa21.12■□□□□ 0.97
TRAF3IP1-203ENST00000409739 PKHD1P08F94 4074 aa21.11■□□□□ 0.97
TRAF3IP1-203ENST00000409739 MGPP08493 103 aa21.11■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TRGC1P0CF51 173 aa21.11■□□□□ 0.97
TRAF3IP1-203ENST00000409739 CT83Q5H943 113 aa21.11■□□□□ 0.97
TRAF3IP1-203ENST00000409739 A8MWL6 223 aa21.1■□□□□ 0.97
TRAF3IP1-203ENST00000409739 Q6ZRN7 208 aaPredicted RBP21.09■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TNFRSF18Q9Y5U5 241 aa21.09■□□□□ 0.97
TRAF3IP1-203ENST00000409739 A0A087WWC5 75 aa21.08■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TMEM241Q24JQ0 296 aa21.08■□□□□ 0.97
TRAF3IP1-203ENST00000409739 C10orf126Q8N4M7 172 aa21.08■□□□□ 0.97
TRAF3IP1-203ENST00000409739 OSTCQ9NRP0 149 aa21.08■□□□□ 0.97
TRAF3IP1-203ENST00000409739 TWIST1Q15672 202 aa21.07■□□□□ 0.96
TRAF3IP1-203ENST00000409739 RPL23P62829 140 aaKnown RBP21.06■□□□□ 0.96
TRAF3IP1-203ENST00000409739 SUMO4Q6EEV6 95 aa21.06■□□□□ 0.96
TRAF3IP1-203ENST00000409739 ISOC2Q96AB3 205 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms