RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 C14orf178Q8N769 122 aaPredicted RBP15.23■□□□□ 0.03
TPM1-208ENST00000404484 C11orf72Q8NBR9 251 aa15.23■□□□□ 0.03
TPM1-208ENST00000404484 CSNK1G2-AS1Q8NCQ2 148 aa15.23■□□□□ 0.03
TPM1-208ENST00000404484 TMEM263Q8WUH6 116 aaKnown RBP15.23■□□□□ 0.03
TPM1-208ENST00000404484 GSN-AS1Q9NRJ2 163 aa15.23■□□□□ 0.03
TPM1-208ENST00000404484 IQCJQ1A5X6 159 aa15.22■□□□□ 0.03
TPM1-208ENST00000404484 PDZD11Q5EBL8 140 aa15.22■□□□□ 0.03
TPM1-208ENST00000404484 NDUFAF3Q9BU61 184 aa15.22■□□□□ 0.03
TPM1-208ENST00000404484 ZNF705AQ6ZN79 300 aaPredicted RBP15.21■□□□□ 0.03
TPM1-208ENST00000404484 TMEM18Q96B42 140 aa15.21■□□□□ 0.03
TPM1-208ENST00000404484 RNASE8Q8TDE3 154 aaKnown RBP15.2■□□□□ 0.02
TPM1-208ENST00000404484 C16orf74Q96GX8 76 aa15.2■□□□□ 0.02
TPM1-208ENST00000404484 MGPP08493 103 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 AKR1D1P51857 326 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 POM121L12Q8N7R1 296 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 CHCHD1Q96BP2 118 aaKnown RBP15.19■□□□□ 0.02
TPM1-208ENST00000404484 NCR2O95944 276 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 PPP1R17O96001 155 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 LINC00310P59036 64 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 RRN3P1Q2M238 152 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 KIF25-AS1Q9Y6Z4 181 aa15.19■□□□□ 0.02
TPM1-208ENST00000404484 A8MWV9 139 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 SMKR1H3BMG3 65 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 PRM2P04554 102 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 AZU1P20160 251 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 RNASEKQ6P5S7 137 aaKnown RBP15.18■□□□□ 0.02
TPM1-208ENST00000404484 HIST1H2BLQ99880 126 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 MAP1LC3AQ9H492 121 aa15.18■□□□□ 0.02
TPM1-208ENST00000404484 IFITM10A6NMD0 228 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 HSBP1O75506 76 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 NPYP01303 97 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 FABP4P15090 132 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 NIT1Q86X76 327 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 PRSS3P2Q8NHM4 247 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 IL17DQ8TAD2 202 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 PACRGQ96M98 296 aaPredicted RBP15.17■□□□□ 0.02
TPM1-208ENST00000404484 SAMD10Q9BYL1 202 aa15.17■□□□□ 0.02
TPM1-208ENST00000404484 NUPR1O60356 82 aa15.16■□□□□ 0.02
TPM1-208ENST00000404484 TNFRSF6BO95407 300 aa15.16■□□□□ 0.02
TPM1-208ENST00000404484 LINC00614P0C842 121 aa15.16■□□□□ 0.02
TPM1-208ENST00000404484 IGHV4-30-4P0DP06 118 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 FA2HQ7L5A8 372 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 JPT2Q9H910 190 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 A0A087WWL8 130 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 SMIM9A6NGZ8 99 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 CRYGDP07320 174 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 LINC00315P59091 139 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 DAZ2Q13117 558 aaKnown RBP15.15■□□□□ 0.02
TPM1-208ENST00000404484 RASL10AQ92737 203 aa15.15■□□□□ 0.02
TPM1-208ENST00000404484 TRAV26-2A0A0B4J265 109 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 RHODO00212 210 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 PMCHP20382 165 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 LGALS9BQ3B8N2 356 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 FAM74A4Q5TZK3 123 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 NRACQ8N912 160 aa15.14■□□□□ 0.01
TPM1-208ENST00000404484 F5H697 171 aa15.13■□□□□ 0.01
TPM1-208ENST00000404484 AMTP48728 403 aa15.13■□□□□ 0.01
TPM1-208ENST00000404484 NXT2Q9NPJ8 142 aaKnown RBP15.13■□□□□ 0.01
TPM1-208ENST00000404484 AP5S1Q9NUS5 200 aa15.13■□□□□ 0.01
TPM1-208ENST00000404484 DNAH9Q9NYC9 4486 aa15.13■□□□□ 0.01
TPM1-208ENST00000404484 LOC389332A0A1B0GUA5 103 aa15.12■□□□□ 0.01
TPM1-208ENST00000404484 PRSS47A8MTI9 375 aa15.12■□□□□ 0.01
TPM1-208ENST00000404484 ZNF56Q15929 161 aa15.12■□□□□ 0.01
TPM1-208ENST00000404484 MRPL16Q9NX20 251 aaKnown RBP15.12■□□□□ 0.01
TPM1-208ENST00000404484 A8MZ25 164 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 GATA1P15976 413 aaPredicted RBP15.11■□□□□ 0.01
TPM1-208ENST00000404484 SUMO4Q6EEV6 95 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 OR10D4PQ8NGN7 298 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 URB1-AS1Q96HZ7 61 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 C20orf78Q9BR46 151 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 TRGV1A0A0A0MS02 117 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 GAS8-AS1O95177 125 aa15.11■□□□□ 0.01
TPM1-208ENST00000404484 IFI27P40305 119 aaPredicted RBP15.11■□□□□ 0.01
TPM1-208ENST00000404484 H7C1H1 209 aa15.1■□□□□ 0.01
TPM1-208ENST00000404484 OVOL2Q9BRP0 275 aa15.1■□□□□ 0.01
TPM1-208ENST00000404484 RS1O15537 224 aa15.09■□□□□ 0.01
TPM1-208ENST00000404484 CFAP126Q5VTH2 177 aa15.09■□□□□ 0.01
TPM1-208ENST00000404484 B9D2Q9BPU9 175 aa15.09■□□□□ 0.01
TPM1-208ENST00000404484 COL7A1Q02388 2944 aa15.09■□□□□ 0.01
TPM1-208ENST00000404484 PLAC8L1A1L4L8 177 aa15.08■□□□□ 0
TPM1-208ENST00000404484 SUMO2P61956 95 aaKnown RBP15.08■□□□□ 0
TPM1-208ENST00000404484 ZFP2Q6ZN57 461 aa15.08■□□□□ 0
TPM1-208ENST00000404484 Q6ZWC4 215 aa15.08■□□□□ 0
TPM1-208ENST00000404484 Q8N8P6 123 aa15.08■□□□□ 0
TPM1-208ENST00000404484 EDA2RQ9HAV5 297 aa15.08■□□□□ 0
TPM1-208ENST00000404484 NOP10Q9NPE3 64 aaKnown RBP15.08■□□□□ 0
TPM1-208ENST00000404484 DEFB135Q30KP9 77 aa15.07■□□□□ 0
TPM1-208ENST00000404484 UFSP1Q6NVU6 142 aa15.07■□□□□ 0
TPM1-208ENST00000404484 FAM19A2Q8N3H0 131 aa15.07■□□□□ 0
TPM1-208ENST00000404484 RPL39LQ96EH5 51 aaKnown RBP15.07■□□□□ 0
TPM1-208ENST00000404484 ST20Q9HBF5 79 aa15.07■□□□□ 0
TPM1-208ENST00000404484 X6R8D5 127 aa15.07■□□□□ 0
TPM1-208ENST00000404484 IGHV1-24A0A0C4DH33 117 aa15.06■□□□□ 0
TPM1-208ENST00000404484 LINC01546A6NGU7 62 aa15.06■□□□□ 0
TPM1-208ENST00000404484 CIDEAO60543 219 aa15.06■□□□□ 0
TPM1-208ENST00000404484 RPL32P62910 135 aaKnown RBP15.06■□□□□ 0
TPM1-208ENST00000404484 Q6ZTI0 123 aa15.06■□□□□ 0
TPM1-208ENST00000404484 OR4C5Q8NGB2 326 aa15.06■□□□□ 0
TPM1-208ENST00000404484 SMIM2Q9BVW6 85 aa15.06■□□□□ 0
TPM1-208ENST00000404484 TRAV4A0A0B4J268 109 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms