RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 VWFP04275 2813 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGHV3-66A0A0C4DH42 116 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 A0A1B0GV50 99 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 RBAKDNA6NC62 111 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 PGPA6NDG6 321 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 OR4C46A6NHA9 309 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 KRBOX1C9JBD0 128 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SLC17A3O00476 420 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SLC25A5P05141 298 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 S100A9P06702 114 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SRP19P09132 144 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 CSN1S1P47710 185 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 ATP5G3P48201 142 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 CMC4P56277 68 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 UBE2G2P60604 165 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SNRPD3P62318 126 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 PSG3Q16557 428 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 RNASEKQ6P5S7 137 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 Q8N976 141 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 CMTM2Q8TAZ6 248 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 BLNKQ8WV28 456 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SMIM12Q96EX1 92 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 SLC35B3Q9H1N7 401 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 MS4A6AQ9H2W1 248 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZMAT5Q9UDW3 170 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 EPDR1Q9UM22 224 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 KLF12Q9Y4X4 402 aa3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 YTHDF2Q9Y5A9 579 aaKnown RBP3.02□□□□□ -1.93
HMGB3P19-201ENST00000403971 TRAV8-2A0A0B4J237 113 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TRBV6-1A0A0K0K1D8 114 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TMEM218A2RU14 115 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 C9JCJ5 164 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 F6UB75 175 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 M0R3E3 92 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 DNASE2O00115 360 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TCRAP04437 139 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TFPI2P48307 235 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 UBE2AP49459 152 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TAS2R60P59551 318 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 HERVK_113P61574 105 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 SOHLH1Q5JUK2 328 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 C10orf91Q5T1B1 145 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 EXOC3-AS1Q8N2X6 119 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 CYB561D1Q8N8Q1 229 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TMEM75Q8N9X5 138 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 SEC11CQ9BY50 192 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 TREM1Q9NP99 234 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 LENEPQ9Y5L5 61 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 LY96Q9Y6Y9 160 aa3.01□□□□□ -1.93
HMGB3P19-201ENST00000403971 CMYA5Q8N3K9 4069 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 IGKV3-7A0A075B6H7 116 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 IZUMO1RA6ND01 250 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 A8MTW9 85 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 C9JQL5 133 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 H0Y8G0 127 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 RTL8CO15255 209 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 SFTA3P0C7M3 94 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 S100A1P23297 94 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 AKR1C3P42330 323 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 RPL35P42766 123 aaKnown RBP3□□□□□ -1.93
HMGB3P19-201ENST00000403971 FLI1Q01543 452 aaPredicted RBP3□□□□□ -1.93
HMGB3P19-201ENST00000403971 DEFB116Q30KQ4 102 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 SAPCD1Q5SSQ6 148 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 FOXI2Q6ZQN5 318 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 PCP2Q8IVA1 136 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 SLC7A5P1Q8MH63 180 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 RNF182Q8N6D2 247 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 OR8A1Q8NGG7 326 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 FMC1Q96HJ9 113 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 LINC00477Q96M19 166 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 ODF3Q96PU9 254 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 SMIM7Q9BQ49 75 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZFP30Q9Y2G7 519 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 CARHSP1Q9Y2V2 147 aaKnown RBP3□□□□□ -1.93
HMGB3P19-201ENST00000403971 ANK2Q01484 3957 aa3□□□□□ -1.93
HMGB3P19-201ENST00000403971 PKD1L1Q8TDX9 2849 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 TRBV20OR9-2A0A075B6H5 130 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 A0A0J9YX75 114 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 XKRY2A2RUG3 117 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF705FA8MVS1 300 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 OR11H12B2RN74 326 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 F8W036 122 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 LTAP01374 205 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF688P0C7X2 276 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 TLX1NBP0CAT3 122 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 HLA-DRB4P13762 266 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ADCYAP1P18509 176 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 HLA-DMBP28068 263 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 ZNF138P52744 262 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 DEFB131AP59861 70 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 UBE2G1P62253 170 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 GNG5P63218 68 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 TMEM241Q24JQ0 296 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 PSMG4Q5JS54 123 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 TMEM78Q5T7P6 136 aa2.99□□□□□ -1.93
HMGB3P19-201ENST00000403971 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms