RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 Q56UQ5 140 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 ZNF518AQ6AHZ1 1483 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 Q6AWC8 147 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 CASZ1Q86V15 1759 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 SPTSSBQ8NFR3 76 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 C10orf82Q8WW14 230 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 LSM10Q969L4 123 aaKnown RBP1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 ROS1P08922 2347 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 PTPRFP10586 1907 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 MYH1P12882 1939 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 NALCNQ8IZF0 1738 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 PIGBOS1A0A0B4J2F0 54 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 APOC4-APOC2K7ER74 178 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 CORTO00230 105 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 IFNA17P01571 189 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 APOC2P02655 101 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 S100A1P23297 94 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 MRPS10P82664 201 aaKnown RBP1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 ZNF56Q15929 161 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 C12orf73Q69YU5 71 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 PPP1R1CQ8WVI7 109 aa1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 HELZP42694 1942 aaKnown RBP1.01□□□□□ -2.25
HMGB1P17-201ENST00000403495 FAM135AQ9P2D6 1515 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
HMGB1P17-201ENST00000403495 A0A1W2PPM0 123 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 GNG4P50150 75 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 KLKP1Q107X0 134 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 COA4Q9NYJ1 87 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 RREB1Q92766 1687 aa1□□□□□ -2.25
HMGB1P17-201ENST00000403495 TANC2Q9HCD6 1990 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 A2ML1A8K2U0 1454 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 KTN1Q86UP2 1357 aaKnown RBP0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 TRBV10-3A0A0K0K1G6 114 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 S100PP25815 95 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 TPPP2P59282 170 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 CATR1Q13166 79 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 MRPL54Q6P161 138 aaKnown RBP0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 Q8N6K4 173 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 Q8N8P6 123 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 BET1LQ9NYM9 111 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 PTPRDP23468 1912 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 MYOM2P54296 1465 aa0.99□□□□□ -2.25
HMGB1P17-201ENST00000403495 TNRC6AQ8NDV7 1962 aaKnown RBP0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 TNFP01375 233 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 CCL3L1P16619 93 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 PPP3R1P63098 170 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 RBM3P98179 157 aaKnown RBP0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 INSL4Q14641 139 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 TMEM14BQ9NUH8 114 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 FOCADQ5VW36 1801 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 FREM3P0C091 2139 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 IFT140Q96RY7 1462 aa0.98□□□□□ -2.25
HMGB1P17-201ENST00000403495 RBAKDNA6NC62 111 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 UBE2D1P51668 147 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 PRB3Q04118 309 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 SSBP1Q04837 148 aaKnown RBP0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 C9orf153Q5TBE3 101 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 FAM74A4Q5TZK3 123 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 COX7B2Q8TF08 81 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 PLAC4Q8WY50 150 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 PPP3R2Q96LZ3 170 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 TCEAL7Q9BRU2 100 aa0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 HEATR1Q9H583 2144 aaKnown RBP0.97□□□□□ -2.25
HMGB1P17-201ENST00000403495 ZFC3H1O60293 1989 aaKnown RBP0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 BCORL1Q5H9F3 1711 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 C20orf202A1L168 122 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 CCL8P80075 99 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 ZNF818PQ6ZRF7 136 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 C8orf59Q8N0T1 100 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 C4orf33Q8N1A6 199 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 DSCR8Q96T75 97 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 C12orf57Q99622 126 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 SPANXDQ9BXN6 97 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 ZNF142P52746 1687 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 DLEC1Q9Y238 1755 aa0.96□□□□□ -2.26
HMGB1P17-201ENST00000403495 QRICH2Q9H0J4 1663 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 FANCMQ8IYD8 2048 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 SPEF2Q9C093 1822 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 KIF13AQ9H1H9 1805 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 TRBV7-1A0A0A6YYK4 115 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 TRAV13-2A0A0B4J235 113 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 OOSP1A8MZH6 123 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 HCG22E2RYF7 251 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 K7EIL1 84 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 LY6G6CO95867 125 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 SPINT3P49223 89 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 SPINK13Q1W4C9 94 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 SVBPQ8N300 66 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 IER3IP1Q9Y5U9 82 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 V9GYV3 84 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 CASKIN1Q8WXD9 1431 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 TRPM7Q96QT4 1865 aa0.95□□□□□ -2.26
HMGB1P17-201ENST00000403495 RIMS1Q86UR5 1692 aaKnown RBP0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 ATP6V1G2-DDX39BF2Z307 99 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 SIX6O95475 246 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 FXYD6P3P58550 94 aa0.94□□□□□ -2.26
HMGB1P17-201ENST00000403495 AQP10Q96PS8 301 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms