RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TCL1BO95988 128 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 MUSTN1Q8IVN3 82 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 TINCRA0A1B0GVN0 87 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 NBL1P41271 181 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 ZNF672Q499Z4 452 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 SPRNQ5BIV9 151 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 PRIMA1Q86XR5 153 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 PHLDA1Q8WV24 401 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 ITLN2Q8WWU7 325 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 IGHV1-69DA0A0B4J2H0 117 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 CENPVL3A0A0U1RRI6 287 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 U3KQE9 123 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 E9PLD3 99 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 H3BUA1 57 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 J3QKU1 62 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 CTSGP08311 255 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 SPANXDQ9BXN6 97 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 TRAV41A0A0B4J266 112 aa4.21□□□□□ -1.73
PTPRD-205ENST00000397611 C22orf34Q6ZV56 151 aa4.21□□□□□ -1.73
PTPRD-205ENST00000397611 A4D1N5 150 aa4.21□□□□□ -1.73
PTPRD-205ENST00000397611 INSL3P51460 131 aa4.21□□□□□ -1.73
PTPRD-205ENST00000397611 ATP5J2P56134 94 aa4.21□□□□□ -1.73
PTPRD-205ENST00000397611 OVOL2Q9BRP0 275 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 ODF1Q14990 250 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 C2orf91Q6ZV80 131 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 IGHV4OR15-8A0A075B7B6 117 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 A0A087WW49 117 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 BUB3O43684 328 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 ICOSQ9Y6W8 199 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 XGP55808 180 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
PTPRD-205ENST00000397611 DYNAPQ8N1N2 210 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 CCDC168Q8NDH2 2452 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 IGKV3D-7A0A0C4DH55 119 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 KNCNA6PVL3 124 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 UBE2E1P51965 193 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
PTPRD-205ENST00000397611 Q8NA96 180 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 EPG5Q9HCE0 2579 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 A0A1B0GX51 115 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 PSMG3-AS1Q96PY0 264 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 SETD2Q9BYW2 2564 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-205ENST00000397611 IGKV2D-26A0A0A0MRZ7 120 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 DUSP14O95147 198 aaKnown RBP4.2□□□□□ -1.74
PTPRD-205ENST00000397611 PRB1P04280 392 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 NDUFA11Q86Y39 141 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 CCL19Q99731 98 aa4.2□□□□□ -1.74
PTPRD-205ENST00000397611 BAALC-AS2P0C853 105 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 ZFP2Q6ZN57 461 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 VMO1Q7Z5L0 202 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 I3L3M4 83 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 IGHV3-53P01767 116 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 APRG1Q8IVJ8 170 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 ACYP1P07311 99 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 FOXE3Q13461 319 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 Q8N1Y9 231 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TMEM86BQ8N661 226 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TET2Q6N021 2002 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-205ENST00000397611 IGHV3-38A0A0C4DH36 116 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 K7ENP7 123 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 NOTCH2Q04721 2471 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 HAMPP81172 84 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 C9orf47Q6ZRZ4 202 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TMEM219Q86XT9 240 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 PRSS33Q8NF86 280 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 TEX49A0A1B0GTD5 131 aa4.19□□□□□ -1.74
PTPRD-205ENST00000397611 F8W735 103 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-205ENST00000397611 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
PTPRD-205ENST00000397611 WNK1Q9H4A3 2382 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 ZFAND3Q9H8U3 227 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 CRIP1P50238 77 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 HHLA3Q9XRX5 114 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 TANC2Q9HCD6 1990 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 TRBV7-1A0A0A6YYK4 115 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 M0QXV9 152 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 MALP21145 153 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 ZNF415Q09FC8 603 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 BAALCQ8WXS3 180 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 AGPAT4-IT1Q9H0P7 198 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 ATOX1O00244 68 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 DAND5Q8N907 189 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 IGHV7-81A0A0B4J1V7 117 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 TMEM89A2RUT3 159 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 GNRH2O43555 120 aa4.18□□□□□ -1.74
PTPRD-205ENST00000397611 DNAJC30Q96LL9 226 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms