RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 Q6ZTI0 123 aa19.69■□□□□ 0.74
CPNE1-203ENST00000397442 TP53TG1Q9Y2A0 90 aa19.69■□□□□ 0.74
CPNE1-203ENST00000397442 LGALS9BQ3B8N2 356 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 ALKBH7Q9BT30 221 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-203ENST00000397442 NACAE9PAV3 2078 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 TRGV1A0A0A0MS02 117 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 SRIP30626 198 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 Q8NAQ8 132 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 NDUFAF3Q9BU61 184 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 RETNQ9HD89 108 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 U3KQK5 164 aa19.68■□□□□ 0.74
CPNE1-203ENST00000397442 POM121L12Q8N7R1 296 aa19.67■□□□□ 0.74
CPNE1-203ENST00000397442 IGHV4-28A0A0C4DH34 117 aa19.66■□□□□ 0.74
CPNE1-203ENST00000397442 MIFP14174 115 aa19.66■□□□□ 0.74
CPNE1-203ENST00000397442 EMP1P54849 157 aa19.66■□□□□ 0.74
CPNE1-203ENST00000397442 SBSPONQ8IVN8 264 aa19.66■□□□□ 0.74
CPNE1-203ENST00000397442 A8MWV9 139 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 D6R8Y8 96 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 GAS8-AS1O95177 125 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 DEFB121Q5J5C9 76 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 UFSP1Q6NVU6 142 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 SMKR1H3BMG3 65 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 SMIM17P0DL12 118 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 FAM74A4Q5TZK3 123 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 CFAP126Q5VTH2 177 aa19.65■□□□□ 0.74
CPNE1-203ENST00000397442 TRAV26-2A0A0B4J265 109 aa19.63■□□□□ 0.73
CPNE1-203ENST00000397442 RS1O15537 224 aa19.63■□□□□ 0.73
CPNE1-203ENST00000397442 NCR2O95944 276 aa19.63■□□□□ 0.73
CPNE1-203ENST00000397442 MGPP08493 103 aa19.63■□□□□ 0.73
CPNE1-203ENST00000397442 DEFB4AO15263 64 aa19.62■□□□□ 0.73
CPNE1-203ENST00000397442 CKS2P33552 79 aa19.62■□□□□ 0.73
CPNE1-203ENST00000397442 ORMDL3Q8N138 153 aa19.62■□□□□ 0.73
CPNE1-203ENST00000397442 PPBPP02775 128 aa19.61■□□□□ 0.73
CPNE1-203ENST00000397442 GATA1P15976 413 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-203ENST00000397442 LINC00612Q8N6U2 182 aa19.61■□□□□ 0.73
CPNE1-203ENST00000397442 MRAP2Q96G30 205 aa19.61■□□□□ 0.73
CPNE1-203ENST00000397442 GAGE12BA1L429 117 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 GAGE7O76087 117 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 GAGE12FP0CL80 117 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 GAGE12GP0CL81 117 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 GAGE12IP0CL82 117 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 C18orf32Q8TCD1 76 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 PRELID3AQ96N28 172 aa19.6■□□□□ 0.73
CPNE1-203ENST00000397442 IGHV3-73A0A0B4J1V6 119 aa19.58■□□□□ 0.72
CPNE1-203ENST00000397442 NPYP01303 97 aa19.58■□□□□ 0.72
CPNE1-203ENST00000397442 Q0VG73 95 aa19.58■□□□□ 0.72
CPNE1-203ENST00000397442 FAM222AQ5U5X8 452 aa19.58■□□□□ 0.72
CPNE1-203ENST00000397442 SUMO4Q6EEV6 95 aa19.58■□□□□ 0.72
CPNE1-203ENST00000397442 NDUFA6P56556 154 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 ZNF56Q15929 161 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 IQCJQ1A5X6 159 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 NRACQ8N912 160 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 MRAPQ8TCY5 172 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 TM2D3Q9BRN9 247 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 DKK2Q9UBU2 259 aa19.57■□□□□ 0.72
CPNE1-203ENST00000397442 TRAV4A0A0B4J268 109 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 LYRM9A8MSI8 78 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 F5H697 171 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 OR10J3Q5JRS4 329 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 OR4C5Q8NGB2 326 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 ZNF479Q96JC4 524 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 TENM3Q9P273 2699 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 RHODO00212 210 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 ZFP2Q6ZN57 461 aa19.56■□□□□ 0.72
CPNE1-203ENST00000397442 Q6ZSN1 163 aa19.55■□□□□ 0.72
CPNE1-203ENST00000397442 TRGV2A0A075B6R0 118 aa19.54■□□□□ 0.72
CPNE1-203ENST00000397442 TNFRSF6BO95407 300 aa19.54■□□□□ 0.72
CPNE1-203ENST00000397442 COA6Q5JTJ3 125 aaKnown RBP19.54■□□□□ 0.72
CPNE1-203ENST00000397442 C18orf15Q96N68 181 aa19.54■□□□□ 0.72
CPNE1-203ENST00000397442 CELA1Q9UNI1 258 aa19.54■□□□□ 0.72
CPNE1-203ENST00000397442 LAMTOR2Q9Y2Q5 125 aa19.54■□□□□ 0.72
CPNE1-203ENST00000397442 M0QY20 66 aa19.53■□□□□ 0.72
CPNE1-203ENST00000397442 DEFB130BP0DP73 79 aa19.53■□□□□ 0.72
CPNE1-203ENST00000397442 DEFB130AP0DP74 79 aa19.53■□□□□ 0.72
CPNE1-203ENST00000397442 RPL39LQ96EH5 51 aaKnown RBP19.53■□□□□ 0.72
CPNE1-203ENST00000397442 IGHV3-53P01767 116 aa19.52■□□□□ 0.72
CPNE1-203ENST00000397442 LINC00310P59036 64 aa19.52■□□□□ 0.72
CPNE1-203ENST00000397442 SPATA25Q9BR10 227 aa19.52■□□□□ 0.72
CPNE1-203ENST00000397442 S100A6P06703 90 aa19.52■□□□□ 0.71
CPNE1-203ENST00000397442 EDA2RQ9HAV5 297 aa19.52■□□□□ 0.71
CPNE1-203ENST00000397442 C5orf52A6NGY3 159 aa19.49■□□□□ 0.71
CPNE1-203ENST00000397442 SNRPEP62304 92 aaKnown RBP19.49■□□□□ 0.71
CPNE1-203ENST00000397442 BAGE3Q86Y29 109 aa19.49■□□□□ 0.71
CPNE1-203ENST00000397442 URB1-AS1Q96HZ7 61 aa19.49■□□□□ 0.71
CPNE1-203ENST00000397442 C11orf68Q9H3H3 251 aaKnown RBP19.49■□□□□ 0.71
CPNE1-203ENST00000397442 NUPR1O60356 82 aa19.48■□□□□ 0.71
CPNE1-203ENST00000397442 SPART-AS1P0CW21 52 aa19.48■□□□□ 0.71
CPNE1-203ENST00000397442 SERF1AO75920 110 aa19.47■□□□□ 0.71
CPNE1-203ENST00000397442 LOC389332A0A1B0GUA5 103 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 PRSS47A8MTI9 375 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 CIDEAO60543 219 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 P0DMU3 169 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 FAM231AP0DMU4 169 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 FAM231CP0DMU5 169 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 Q9UF83 564 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 PPP1R17O96001 155 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 MAP1LC3AQ9H492 121 aa19.46■□□□□ 0.71
CPNE1-203ENST00000397442 IFI27P40305 119 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-203ENST00000397442 FHL2Q14192 279 aa19.45■□□□□ 0.7
CPNE1-203ENST00000397442 NIT1Q86X76 327 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms