RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PHLDA3Q9Y5J5 127 aa18.11■□□□□ 0.49
CSNK1E-203ENST00000396832 GNRH2O43555 120 aa18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 TSPEAR-AS2P59090 65 aa18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 RAX2Q96IS3 184 aa18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 C9JAW5 83 aa18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 RNASE4P34096 147 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 MUC4Q99102 2169 aa18.1■□□□□ 0.49
CSNK1E-203ENST00000396832 ITPR1Q14643 2758 aa18.09■□□□□ 0.49
CSNK1E-203ENST00000396832 CRIP2P52943 208 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-203ENST00000396832 ABCA2Q9BZC7 2435 aa18.09■□□□□ 0.49
CSNK1E-203ENST00000396832 UBTD1Q9HAC8 227 aa18.09■□□□□ 0.49
CSNK1E-203ENST00000396832 PAPPA-AS1Q5QFB9 102 aa18.08■□□□□ 0.49
CSNK1E-203ENST00000396832 TRPT1Q86TN4 253 aaKnown RBP18.08■□□□□ 0.49
CSNK1E-203ENST00000396832 K7ENP7 123 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 ANXA2RQ3ZCQ2 193 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 GPHB5Q86YW7 130 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 TP53TG1Q9Y2A0 90 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 CSMD2Q7Z408 3487 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 BRD3OSQ6XYD6 125 aa18.08■□□□□ 0.48
CSNK1E-203ENST00000396832 CSPG4Q6UVK1 2322 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 TMEM170BQ5T4T1 132 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 DOPEY2Q9Y3R5 2298 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 RHODO00212 210 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 ASIPP42127 132 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 GAGE2BQ13066 116 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 GAGE2EQ4V326 116 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 BPESC1Q9GZL8 116 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 GAGE2DQ9UEU5 116 aa18.07■□□□□ 0.48
CSNK1E-203ENST00000396832 OOSP1A8MZH6 123 aa18.06■□□□□ 0.48
CSNK1E-203ENST00000396832 ARL3P36405 182 aa18.06■□□□□ 0.48
CSNK1E-203ENST00000396832 PMVKQ15126 192 aa18.06■□□□□ 0.48
CSNK1E-203ENST00000396832 JPT2Q9H910 190 aa18.06■□□□□ 0.48
CSNK1E-203ENST00000396832 IGIPA6NJ69 53 aa18.05■□□□□ 0.48
CSNK1E-203ENST00000396832 ZFAND2AQ8N6M9 145 aa18.05■□□□□ 0.48
CSNK1E-203ENST00000396832 TRAV4A0A0B4J268 109 aa18.04■□□□□ 0.48
CSNK1E-203ENST00000396832 SNCGO76070 127 aa18.04■□□□□ 0.48
CSNK1E-203ENST00000396832 UBE2E1P51965 193 aa18.04■□□□□ 0.48
CSNK1E-203ENST00000396832 TRAV21A0A0B4J279 112 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 H7C2G1 150 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 CRLF1O75462 422 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 NDUFV3P56181 108 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 RPL39P62891 51 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 LY6EQ16553 131 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 IGHV1-69DA0A0B4J2H0 117 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 A4D1N5 150 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 PPP1R17O96001 155 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 EDN2P20800 178 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 C5orf56Q8N8D9 126 aa18.03■□□□□ 0.48
CSNK1E-203ENST00000396832 TRBV7-1A0A0A6YYK4 115 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 FBXL19-AS1Q494R0 122 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 C1orf122Q6ZSJ8 110 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 OR10J6PQ8NGY7 276 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 ZNRF2Q8NHG8 242 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 AMELXQ99217 191 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 LENEPQ9Y5L5 61 aa18.02■□□□□ 0.48
CSNK1E-203ENST00000396832 CREBBPQ92793 2442 aa18.02■□□□□ 0.47
CSNK1E-203ENST00000396832 J3QQQ9 107 aa18.02■□□□□ 0.47
CSNK1E-203ENST00000396832 A0A087WWL8 130 aa18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 TRAV41A0A0B4J266 112 aa18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 EIF4EBP3O60516 100 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 IGHV3-33P01772 117 aa18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 M0QXV9 152 aa18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 NTN5Q8WTR8 489 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-203ENST00000396832 NPFFO15130 113 aa18■□□□□ 0.47
CSNK1E-203ENST00000396832 LGALS3P17931 250 aaKnown RBP18■□□□□ 0.47
CSNK1E-203ENST00000396832 LINC00477Q96M19 166 aa18■□□□□ 0.47
CSNK1E-203ENST00000396832 Q8N1Y9 231 aa18■□□□□ 0.47
CSNK1E-203ENST00000396832 U3KQE9 123 aa18■□□□□ 0.47
CSNK1E-203ENST00000396832 TTC32Q5I0X7 151 aa17.99■□□□□ 0.47
CSNK1E-203ENST00000396832 C9orf139Q6ZV77 190 aa17.99■□□□□ 0.47
CSNK1E-203ENST00000396832 ITLN2Q8WWU7 325 aaPredicted RBP17.99■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE12JA6NER3 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE7O76087 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE12FP0CL80 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE12GP0CL81 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE12IP0CL82 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 GAGE4Q13068 117 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 TMEM263Q8WUH6 116 aaKnown RBP17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 CCDC179H3BU77 68 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 TMEM141Q96I45 108 aa17.98■□□□□ 0.47
CSNK1E-203ENST00000396832 RNASE3P12724 160 aaKnown RBP17.97■□□□□ 0.47
CSNK1E-203ENST00000396832 PKD1L2Q7Z442 2459 aa17.97■□□□□ 0.47
CSNK1E-203ENST00000396832 IFITM1P13164 125 aa17.97■□□□□ 0.47
CSNK1E-203ENST00000396832 FAM74A4Q5TZK3 123 aa17.97■□□□□ 0.47
CSNK1E-203ENST00000396832 F5H697 171 aa17.96■□□□□ 0.47
CSNK1E-203ENST00000396832 ELANEP08246 267 aa17.96■□□□□ 0.47
CSNK1E-203ENST00000396832 TRAV2A0A0B4J234 112 aa17.96■□□□□ 0.47
CSNK1E-203ENST00000396832 ZNF876PQ49A33 203 aa17.96■□□□□ 0.47
CSNK1E-203ENST00000396832 POLR2KP53803 58 aaKnown RBP17.96■□□□□ 0.46
CSNK1E-203ENST00000396832 IGKV3-20P01619 116 aa17.95■□□□□ 0.46
CSNK1E-203ENST00000396832 LINC00315P59091 139 aa17.95■□□□□ 0.46
CSNK1E-203ENST00000396832 TIMM17AQ99595 171 aa17.95■□□□□ 0.46
CSNK1E-203ENST00000396832 MED14OSP0DP75 135 aa17.95■□□□□ 0.46
CSNK1E-203ENST00000396832 MUSTN1Q8IVN3 82 aa17.95■□□□□ 0.46
CSNK1E-203ENST00000396832 ZFYVE26Q68DK2 2539 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 TEX49A0A1B0GTD5 131 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 IGHV4-39P01824 125 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 P0DMU3 169 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 FAM231AP0DMU4 169 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 FAM231CP0DMU5 169 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms