RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PDZD11Q5EBL8 140 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 IL17DQ8TAD2 202 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 EVI2AP22794 236 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
VAPB-202ENST00000395802 CIDEAO60543 219 aa9.85□□□□□ -0.83
VAPB-202ENST00000395802 PPBPP02775 128 aa9.85□□□□□ -0.83
VAPB-202ENST00000395802 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
VAPB-202ENST00000395802 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 RHODO00212 210 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 NUPR1O60356 82 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
VAPB-202ENST00000395802 AKR1D1P51857 326 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 AMN1Q8IY45 258 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
VAPB-202ENST00000395802 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 DNHD1Q96M86 4753 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 SERF1AO75920 110 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 PPP1R17O96001 155 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 ESDP10768 282 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 HIST1H2BLQ99880 126 aa9.84□□□□□ -0.83
VAPB-202ENST00000395802 PLAC8L1A1L4L8 177 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 S100A2P29034 98 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 EMP1P54849 157 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
VAPB-202ENST00000395802 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 RAB4AP20338 218 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 CKS2P33552 79 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 IQCJQ1A5X6 159 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 MRPL16Q9NX20 251 aaKnown RBP9.82□□□□□ -0.84
VAPB-202ENST00000395802 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 IGHV4-28A0A0C4DH34 117 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 FABP4P15090 132 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 MRPL51Q4U2R6 128 aaKnown RBP9.82□□□□□ -0.84
VAPB-202ENST00000395802 FAM74A4Q5TZK3 123 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 Q8NAQ8 132 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 RNF185Q96GF1 192 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 U3KQK5 164 aa9.82□□□□□ -0.84
VAPB-202ENST00000395802 TRAV4A0A0B4J268 109 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 F5H697 171 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 H7C1H1 209 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 MGPP08493 103 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 SBSPONQ8IVN8 264 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 C18orf15Q96N68 181 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 NBEAL2Q6ZNJ1 2754 aa9.81□□□□□ -0.84
VAPB-202ENST00000395802 A0A087WWL8 130 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 D6R8Y8 96 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 RS1O15537 224 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 CRYGDP07320 174 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 SPART-AS1P0CW21 52 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 Q6ZTI0 123 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 TM2D3Q9BRN9 247 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 KIF25-AS1Q9Y6Z4 181 aa9.8□□□□□ -0.84
VAPB-202ENST00000395802 ZNF56Q15929 161 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 TMEM18Q96B42 140 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 PACRGQ96M98 296 aaPredicted RBP9.79□□□□□ -0.84
VAPB-202ENST00000395802 C11orf68Q9H3H3 251 aaKnown RBP9.79□□□□□ -0.84
VAPB-202ENST00000395802 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 GAGE7O76087 117 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 GAGE12FP0CL80 117 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 GAGE12GP0CL81 117 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 GAGE12IP0CL82 117 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 DKK2Q9UBU2 259 aa9.79□□□□□ -0.84
VAPB-202ENST00000395802 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 OR10D4PQ8NGN7 298 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 PRELID3AQ96N28 172 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 JPT2Q9H910 190 aa9.78□□□□□ -0.84
VAPB-202ENST00000395802 LINC00315P59091 139 aa9.77□□□□□ -0.84
VAPB-202ENST00000395802 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.84
VAPB-202ENST00000395802 DEFB130BP0DP73 79 aa9.77□□□□□ -0.85
VAPB-202ENST00000395802 DEFB130AP0DP74 79 aa9.77□□□□□ -0.85
VAPB-202ENST00000395802 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
VAPB-202ENST00000395802 NACAE9PAV3 2078 aa9.77□□□□□ -0.85
VAPB-202ENST00000395802 SMKR1H3BMG3 65 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 NCR2O95944 276 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 NPYP01303 97 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 DAD1P61803 113 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 UFSP1Q6NVU6 142 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 NIT1Q86X76 327 aa9.76□□□□□ -0.85
VAPB-202ENST00000395802 DEFB4AO15263 64 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 NHLRC4P0CG21 123 aaPredicted RBP9.75□□□□□ -0.85
VAPB-202ENST00000395802 SMIM6P0DI80 62 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 SUMO4Q6EEV6 95 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 RNASEKQ6P5S7 137 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms