RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 A0A087WTM6 91 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 SCO2A0A1W2PP80 73 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 M0R381 172 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 RAB5CP51148 216 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 Q6ZSN1 163 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 JPT2Q9H910 190 aa9.29□□□□□ -0.92
CXCL12-205ENST00000395794 A0A087WWC5 75 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 SFRP2Q96HF1 295 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 SAMD10Q9BYL1 202 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 MANBALQ9NQG1 85 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 GNG13Q9P2W3 67 aa9.28□□□□□ -0.92
CXCL12-205ENST00000395794 A0A087WWL8 130 aa9.27□□□□□ -0.93
CXCL12-205ENST00000395794 IBA57-AS1B1ANH7 110 aa9.27□□□□□ -0.93
CXCL12-205ENST00000395794 Q9HAA7 133 aa9.27□□□□□ -0.93
CXCL12-205ENST00000395794 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
CXCL12-205ENST00000395794 PRR27Q6MZM9 219 aa9.26□□□□□ -0.93
CXCL12-205ENST00000395794 UFSP1Q6NVU6 142 aa9.26□□□□□ -0.93
CXCL12-205ENST00000395794 C14orf178Q8N769 122 aaPredicted RBP9.26□□□□□ -0.93
CXCL12-205ENST00000395794 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
CXCL12-205ENST00000395794 TRAV1-1A0A0B4J248 108 aa9.25□□□□□ -0.93
CXCL12-205ENST00000395794 RPL35P42766 123 aaKnown RBP9.25□□□□□ -0.93
CXCL12-205ENST00000395794 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
CXCL12-205ENST00000395794 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
CXCL12-205ENST00000395794 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 IFNA1P01562 189 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 CXCL1P09341 107 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 LINC00694P0DN24 101 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 RPL36AP83881 106 aaKnown RBP9.24□□□□□ -0.93
CXCL12-205ENST00000395794 LAGE3Q14657 143 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 TOR2AQ5JU69 321 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 TCTE3Q8IZS6 198 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 RPL36ALQ969Q0 106 aaKnown RBP9.24□□□□□ -0.93
CXCL12-205ENST00000395794 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
CXCL12-205ENST00000395794 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
CXCL12-205ENST00000395794 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
CXCL12-205ENST00000395794 CCL20P78556 96 aa9.23□□□□□ -0.93
CXCL12-205ENST00000395794 RPL19P84098 196 aaKnown RBP9.23□□□□□ -0.93
CXCL12-205ENST00000395794 KCNIP4Q6PIL6 250 aa9.23□□□□□ -0.93
CXCL12-205ENST00000395794 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.23□□□□□ -0.93
CXCL12-205ENST00000395794 DAZAP1Q96EP5 407 aaKnown RBP9.23□□□□□ -0.93
CXCL12-205ENST00000395794 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 SULT1A2P50226 295 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 RAB4BP61018 213 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 ZNF56Q15929 161 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 SLC51BQ86UW2 128 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 Q8N1X5 172 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 C11orf52Q96A22 123 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 Q9UF83 564 aa9.22□□□□□ -0.93
CXCL12-205ENST00000395794 ABCA13Q86UQ4 5058 aa9.21□□□□□ -0.93
CXCL12-205ENST00000395794 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 PDE6DO43924 150 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 C1QBP02746 253 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 OR5AL1P0C617 328 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 GCSHP23434 173 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 GNG4P50150 75 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 SSTP61278 116 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
CXCL12-205ENST00000395794 CENPWQ5EE01 88 aa9.21□□□□□ -0.94
CXCL12-205ENST00000395794 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 HSPG2P98160 4391 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 A0A087WX48 190 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 MUC21A0A0G2JKD1 596 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 MUC21A0A140T8X8 626 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 F5H697 171 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 SNAI2O43623 268 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 RPS20P60866 119 aaKnown RBP9.2□□□□□ -0.94
CXCL12-205ENST00000395794 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
CXCL12-205ENST00000395794 RMI2Q96E14 147 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 DERL1Q9BUN8 251 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 SSBP4Q9BWG4 385 aaPredicted RBP9.2□□□□□ -0.94
CXCL12-205ENST00000395794 COX11Q9Y6N1 276 aa9.2□□□□□ -0.94
CXCL12-205ENST00000395794 XKRY2A2RUG3 117 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 TAGLN2P37802 199 aaKnown RBP9.19□□□□□ -0.94
CXCL12-205ENST00000395794 ELOBQ15370 118 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
CXCL12-205ENST00000395794 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 BIN3Q9NQY0 253 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
CXCL12-205ENST00000395794 MED9Q9NWA0 146 aa9.19□□□□□ -0.94
CXCL12-205ENST00000395794 UBE2D3P61077 147 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 UBE2D2P62837 147 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 AKAP14Q86UN6 197 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 NIT1Q86X76 327 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 Q8N3U1 123 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 Q8N814 137 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
CXCL12-205ENST00000395794 OR10G8Q8NGN5 311 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms