RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 SRSF1Q07955 248 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■□□□□ 11.1
SREBF1-205ENST00000395757 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 KRTAP10-9P60411 292 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 OR11H12B2RN74 326 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 NDUFA4O00483 81 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 OVOL1O14753 267 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 OR11H2Q8NH07 326 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 APOMO95445 188 aa10.94□□□□□ -0.66
SREBF1-205ENST00000395757 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
SREBF1-205ENST00000395757 DEFB131AP59861 70 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
SREBF1-205ENST00000395757 SLURP1P55000 103 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
SREBF1-205ENST00000395757 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 CD5LO43866 347 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 ATP5LO75964 103 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 MRPL23Q16540 153 aaKnown RBP10.93□□□□□ -0.66
SREBF1-205ENST00000395757 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
SREBF1-205ENST00000395757 TRBV20-1A0A075B6N2 111 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 C18orf65Q6ZTR6 163 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 UBE2E2Q96LR5 201 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
SREBF1-205ENST00000395757 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 Q96MF0 132 aa10.92□□□□□ -0.66
SREBF1-205ENST00000395757 ETDBQ3ZM63 59 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 IGHG2P01859 326 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 Q8N8P6 123 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 TSPAN13O95857 204 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 LINC01356Q8N9X3 169 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 KIR2DL4Q99706 377 aa10.91□□□□□ -0.66
SREBF1-205ENST00000395757 SH2D6Q7Z4S9 175 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
SREBF1-205ENST00000395757 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 A0A087WW49 117 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 FABP2P12104 132 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
SREBF1-205ENST00000395757 A6NDX4 124 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 C5orf47Q569G3 176 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 APRG1Q8IVJ8 170 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 DUSP14O95147 198 aaKnown RBP10.89□□□□□ -0.67
SREBF1-205ENST00000395757 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 FXYD2P54710 66 aa10.89□□□□□ -0.67
SREBF1-205ENST00000395757 PHLDA1Q8WV24 401 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-205ENST00000395757 IGHV3-38A0A0C4DH36 116 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-205ENST00000395757 AMTNQ6UX39 209 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 A0A0U1RRA0 63 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 C9orf47Q6ZRZ4 202 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 MXRA5Q9NR99 2828 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
SREBF1-205ENST00000395757 LINC01587Q99440 93 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 PRSS2P07478 247 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 NPC2P61916 151 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 BBC3Q96PG8 261 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-205ENST00000395757 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 K7EP34 96 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 C2orf91Q6ZV80 131 aa10.87□□□□□ -0.67
SREBF1-205ENST00000395757 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
SREBF1-205ENST00000395757 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 SCGB1C2P0DMR2 95 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 P0DMU3 169 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 ZNF418Q8TF45 676 aaPredicted RBP10.86□□□□□ -0.67
SREBF1-205ENST00000395757 SLC25A16P16260 332 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 Q1RN00 199 aa10.86□□□□□ -0.67
SREBF1-205ENST00000395757 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
SREBF1-205ENST00000395757 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
SREBF1-205ENST00000395757 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
SREBF1-205ENST00000395757 TRAV25A0A0B4J276 109 aa10.85□□□□□ -0.67
SREBF1-205ENST00000395757 GPHB5Q86YW7 130 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms