RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TEX22C9J3V5 150 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 NCR3O14931 201 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 CRYBA4P53673 196 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 PATE2Q6UY27 113 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 NTN5Q8WTR8 489 aaPredicted RBP8□□□□□ -1.13
COL4A6-203ENST00000394872 FANCD2OSQ96PS1 177 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 TMEM258P61165 79 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 Q8NA96 180 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 C9orf47Q6ZRZ4 202 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 INSL3P51460 131 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 PCP2Q8IVA1 136 aa8□□□□□ -1.13
COL4A6-203ENST00000394872 PLA2G5P39877 138 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 MSRB1Q9NZV6 116 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 A6NDX4 124 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 IL15RAQ13261 267 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 DEFB125Q8N687 156 aa7.99□□□□□ -1.13
COL4A6-203ENST00000394872 TRBV12-3P01733 135 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
COL4A6-203ENST00000394872 LOXL1Q08397 574 aaPredicted RBP7.98□□□□□ -1.13
COL4A6-203ENST00000394872 IL17DQ8TAD2 202 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 FBXL19-AS1Q494R0 122 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 SPRY4Q9C004 299 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 DEFB1P60022 68 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 IGLV1-47P01700 117 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 NDUFA11Q86Y39 141 aa7.98□□□□□ -1.13
COL4A6-203ENST00000394872 PROP1O75360 226 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 MUSTN1Q8IVN3 82 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 NDUFB1O75438 58 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 Q6ZSR3 168 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
COL4A6-203ENST00000394872 MALRD1Q5VYJ5 2156 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 PCNX1Q96RV3 2341 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 WISP2O76076 250 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 LRRC75A-AS1Q8N1F1 130 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 C11orf45Q8TAV5 145 aa7.97□□□□□ -1.13
COL4A6-203ENST00000394872 TMEM263Q8WUH6 116 aaKnown RBP7.97□□□□□ -1.13
COL4A6-203ENST00000394872 UNQ9165/PRO28630Q6UXU0 137 aa7.96□□□□□ -1.13
COL4A6-203ENST00000394872 OPRPNQ99935 248 aaPredicted RBP7.96□□□□□ -1.13
COL4A6-203ENST00000394872 PLXNB3Q9ULL4 1909 aa7.96□□□□□ -1.13
COL4A6-203ENST00000394872 C19orf84I3L1E1 186 aa7.96□□□□□ -1.13
COL4A6-203ENST00000394872 SPAG11BQ08648 103 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 TMEM61Q8N0U2 210 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 MAP6D1Q9H9H5 199 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 H0YGX0 51 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
COL4A6-203ENST00000394872 IGHV4-31P0DP07 118 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 DYSFO75923 2080 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 NDUFC2O95298 119 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 C2orf16Q68DN1 1984 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 E7EUB6 86 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 TNFRSF13BO14836 293 aaPredicted RBP7.95□□□□□ -1.14
COL4A6-203ENST00000394872 DAND5Q8N907 189 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 INAFM1C9JVW0 142 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 BAALCQ8WXS3 180 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 TMEM131Q92545 1883 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
COL4A6-203ENST00000394872 FAM167A-AS1Q96KT0 104 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 MDFICQ9P1T7 246 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 SPTAN1Q13813 2472 aaKnown RBP7.94□□□□□ -1.14
COL4A6-203ENST00000394872 H3BQ85 93 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 TOMM6Q96B49 74 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 CXCL5P42830 114 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 MSMPQ1L6U9 139 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 C5orf47Q569G3 176 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 Q6ZVH6 145 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 NBASA2RRP1 2371 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 CCL25O15444 150 aa7.94□□□□□ -1.14
COL4A6-203ENST00000394872 PCNX2A6NKB5 2137 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 A0A0J9YX75 114 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 A4D1N5 150 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 GTSF1Q8WW33 167 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 MED13Q9UHV7 2174 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 RNF183Q96D59 192 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 ACYP1P07311 99 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 Q6YL49 198 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 WFDC11Q8NEX6 87 aa7.93□□□□□ -1.14
COL4A6-203ENST00000394872 NREPQ16612 68 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 IGLV2-14P01704 120 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 LMO4P61968 165 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.92□□□□□ -1.142e-8■■■■■ 31.6
COL4A6-203ENST00000394872 C14orf177Q52M58 125 aa7.92□□□□□ -1.14
COL4A6-203ENST00000394872 TRAV26-1A0A087WT03 109 aa7.91□□□□□ -1.14
COL4A6-203ENST00000394872 B9D2Q9BPU9 175 aa7.91□□□□□ -1.14
COL4A6-203ENST00000394872 J3KT08 172 aa7.91□□□□□ -1.14
COL4A6-203ENST00000394872 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
COL4A6-203ENST00000394872 CTRLP40313 264 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms