RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
ACTN1-203ENST00000394419 HERVK_113P61574 105 aa7.97□□□□□ -1.13
ACTN1-203ENST00000394419 HIST2H2BDQ6DRA6 164 aa7.97□□□□□ -1.13
ACTN1-203ENST00000394419 OR5A1Q8NGJ0 315 aa7.97□□□□□ -1.13
ACTN1-203ENST00000394419 ZNF418Q8TF45 676 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-203ENST00000394419 B4DSR2 109 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 HLA-DRB4P13762 266 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 DEFB112Q30KQ8 113 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 ETDBQ3ZM63 59 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 C10orf105Q8TEF2 133 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 HLA-DRB4X5D2U9 266 aa7.96□□□□□ -1.13
ACTN1-203ENST00000394419 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.14
ACTN1-203ENST00000394419 KNCNA6PVL3 124 aa7.96□□□□□ -1.14
ACTN1-203ENST00000394419 AVPP01185 164 aa7.96□□□□□ -1.14
ACTN1-203ENST00000394419 IGHG2P01859 326 aa7.96□□□□□ -1.14
ACTN1-203ENST00000394419 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.14
ACTN1-203ENST00000394419 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 DUX3Q96PT4 197 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 BEX4Q9NWD9 120 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-203ENST00000394419 U3KQE9 123 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 IGSF10Q6WRI0 2623 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 A0A1B0GWB2 263 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-203ENST00000394419 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 GPHB5Q86YW7 130 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 FN1P02751 2386 aaKnown RBP7.95□□□□□ -1.14
ACTN1-203ENST00000394419 IGLV2-18A0A075B6J9 118 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 TEX48A0A1B0GUV7 120 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 DEFB136Q30KP8 78 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 ZNF876PQ49A33 203 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 BAALCQ8WXS3 180 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 MDFICQ9P1T7 246 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 ZFHX3Q15911 3703 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
ACTN1-203ENST00000394419 HIVEP2P31629 2446 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 TRAV26-1A0A087WT03 109 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 PSMB2P49721 201 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 WFDC2Q14508 124 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 Q1RN00 199 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 OPRPNQ99935 248 aaPredicted RBP7.94□□□□□ -1.14
ACTN1-203ENST00000394419 LENEPQ9Y5L5 61 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 SUMO4Q6EEV6 95 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 J3QR89 54 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 PPP1R17O96001 155 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 PRSS2P07478 247 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 RNASE3P12724 160 aaKnown RBP7.94□□□□□ -1.14
ACTN1-203ENST00000394419 C20orf78Q9BR46 151 aa7.94□□□□□ -1.14
ACTN1-203ENST00000394419 A6NDX4 124 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 LINC01549A6NIU2 74 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 IGLL5B9A064 214 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 VCYO14598 125 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
ACTN1-203ENST00000394419 A0A1B0GV72 72 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 RNF223E7ERA6 249 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 PRB1P04280 392 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 PRM2P04554 102 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 AZU1P20160 251 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
ACTN1-203ENST00000394419 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
ACTN1-203ENST00000394419 A6NJY4 79 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 CRYBA4P53673 196 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 GAGE13Q4V321 117 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 TEX15Q9BXT5 2789 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 HIGD1BQ9P298 99 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 MUC4Q99102 2169 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 Q8N1Y9 231 aa7.92□□□□□ -1.14
ACTN1-203ENST00000394419 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 PLEKHB2Q96CS7 222 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 PSMG3-AS1Q96PY0 264 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 ZMAT4Q9H898 229 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 TRAV2A0A0B4J234 112 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 DEFB131AP59861 70 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 UFSP1Q6NVU6 142 aa7.91□□□□□ -1.14
ACTN1-203ENST00000394419 ADARB2-AS1A8MUL3 147 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 LGALS1P09382 135 aaKnown RBP7.9□□□□□ -1.14
ACTN1-203ENST00000394419 PMVKQ15126 192 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 NEXN-AS1Q8NBZ9 246 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 VCX2Q9H322 139 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 A0A1W2PRX2 142 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 RAX2Q96IS3 184 aa7.9□□□□□ -1.14
ACTN1-203ENST00000394419 NPC2P61916 151 aa7.9□□□□□ -1.15
ACTN1-203ENST00000394419 TCTEX1D4Q5JR98 221 aa7.9□□□□□ -1.15
ACTN1-203ENST00000394419 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 CKS1BP61024 79 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 FOXI2Q6ZQN5 318 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 SPXQ9BT56 116 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 CHD6Q8TD26 2715 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 CSMD2Q7Z408 3487 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 IGHV3-16A0A0C4DH30 117 aa7.89□□□□□ -1.15
ACTN1-203ENST00000394419 TSSC4Q9Y5U2 329 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-203ENST00000394419 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
ACTN1-203ENST00000394419 A0A087WW49 117 aa7.88□□□□□ -1.15
ACTN1-203ENST00000394419 SOCS3O14543 225 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms