RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 RNF7Q9UBF6 113 aa5.91□□□□□ -1.46
VTI1A-201ENST00000393077 NAV3Q8IVL0 2385 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 NDUFB3O43676 98 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 NDPQ00604 133 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 PDE6HQ13956 83 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 KRTAP27-1Q3LI81 207 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 DYNAPQ8N1N2 210 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 CD177Q8N6Q3 437 aa5.9□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV3OR16-8A0A075B7F1 116 aa5.9□□□□□ -1.47
VTI1A-201ENST00000393077 C15orf65H3BRN8 121 aa5.9□□□□□ -1.47
VTI1A-201ENST00000393077 WDR86Q86TI4 376 aa5.9□□□□□ -1.47
VTI1A-201ENST00000393077 MPLKIPQ8TAP9 179 aa5.9□□□□□ -1.47
VTI1A-201ENST00000393077 TMEM141Q96I45 108 aa5.9□□□□□ -1.47
VTI1A-201ENST00000393077 VCYO14598 125 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 TMEM30BQ3MIR4 351 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 DKK1O94907 266 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 Q6ZS46 218 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 PRSS33Q8NF86 280 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 NDUFA12Q9UI09 145 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 SS18L1O75177 396 aaPredicted RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 TOMM6Q96B49 74 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV3OR16-13A0A075B7E8 117 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 TRBV7-1A0A0A6YYK4 115 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV3-74A0A0B4J1X5 117 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 LEPROTO15243 131 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 DAZ2Q13117 558 aaKnown RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 EIF4EBP1Q13541 118 aaPredicted RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 LINC00336Q6ZUF6 198 aa5.89□□□□□ -1.47
VTI1A-201ENST00000393077 DAZ4Q86SG3 579 aaKnown RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 DAZ1Q9NQZ3 744 aaKnown RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 DAZ3Q9NR90 486 aaKnown RBP5.89□□□□□ -1.47
VTI1A-201ENST00000393077 TMEM131Q92545 1883 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 A0A1W2PRX2 142 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 PROP1O75360 226 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 COX7A1P24310 79 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 LINC01560Q8TB33 94 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 IGKV3D-20A0A0C4DH25 116 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 TRBV6-1A0A0K0K1D8 114 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 TRGV3P03979 118 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 TMEM200BQ69YZ2 307 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 C11orf53Q8IXP5 236 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 SORL1Q92673 2214 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 TIMM17BO60830 172 aa5.88□□□□□ -1.47
VTI1A-201ENST00000393077 GAS8-AS1O95177 125 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 CD28P10747 220 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 CRIP1P50238 77 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 MRPL36Q9P0J6 103 aaKnown RBP5.87□□□□□ -1.47
VTI1A-201ENST00000393077 ARHGAP32A7KAX9 2087 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 NOTCH3Q9UM47 2321 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 ZNF503-AS2A6NEH8 195 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 TMEM263Q8WUH6 116 aaKnown RBP5.87□□□□□ -1.47
VTI1A-201ENST00000393077 FAM19A4Q96LR4 140 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 UBL5Q9BZL1 73 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 PSMB8P28062 276 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 RNF138Q8WVD3 245 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 OVOL2Q9BRP0 275 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 VCANP13611 3396 aa5.87□□□□□ -1.47
VTI1A-201ENST00000393077 I3L3M4 83 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 LST1O00453 97 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 FAM216BQ8N7L0 139 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 RNF185Q96GF1 192 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 ZNRD1Q9P1U0 126 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 CSPG4Q6UVK1 2322 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV1-69DA0A0B4J2H0 117 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV3-66A0A0C4DH42 116 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 FANCD2OSQ96PS1 177 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 PTPRBP23467 1997 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 IGKV1D-37A0A075B6S9 117 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV1-18A0A0C4DH31 117 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 WISP2O76076 250 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 GATA4P43694 442 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 BSPH1Q075Z2 132 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
VTI1A-201ENST00000393077 Q9UFV3 132 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 MYO18BQ8IUG5 2567 aa5.86□□□□□ -1.47
VTI1A-201ENST00000393077 IGKV3-7A0A075B6H7 116 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 C17orf100A8MU93 164 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 CRPP02741 224 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 DAD1P61803 113 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 FAM90A1Q86YD7 464 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 PTPN13Q12923 2485 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 IGHV3-49A0A0A0MS15 119 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 SRRM5B3KS81 715 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 IGLV2-11P01706 119 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 IGHG3P01860 377 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 LOXP28300 417 aaPredicted RBP5.85□□□□□ -1.47
VTI1A-201ENST00000393077 EBI3Q14213 229 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 PRIMA1Q86XR5 153 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 MALRD1Q5VYJ5 2156 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 IGKV1D-17A0A075B6S4 117 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 H3BRN7 92 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 RITA1Q96K30 269 aa5.85□□□□□ -1.47
VTI1A-201ENST00000393077 CRYGDP07320 174 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms