RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 TIRAPP58753 221 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 A0A087WW49 117 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 IGHV1-58A0A0C4DH39 117 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 MLST8Q9BVC4 326 aa12.48□□□□□ -0.41
SHANK1-204ENST00000391814 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 ARFGEF3Q5TH69 2177 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 PROP1O75360 226 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 MIAQ16674 131 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 TMEM256-PLSCR3K7ERE1 68 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 TP53TG3Q9ULZ0 132 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
SHANK1-204ENST00000391814 PLXNB3Q9ULL4 1909 aa12.46□□□□□ -0.41
SHANK1-204ENST00000391814 DAZ2Q13117 558 aaKnown RBP12.46□□□□□ -0.41
SHANK1-204ENST00000391814 DAZ4Q86SG3 579 aaKnown RBP12.46□□□□□ -0.41
SHANK1-204ENST00000391814 DAZ3Q9NR90 486 aaKnown RBP12.46□□□□□ -0.41
SHANK1-204ENST00000391814 CTSZQ9UBR2 303 aa12.46□□□□□ -0.41
SHANK1-204ENST00000391814 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
SHANK1-204ENST00000391814 WFDC11Q8NEX6 87 aa12.46□□□□□ -0.42
SHANK1-204ENST00000391814 NPBQ8NG41 125 aa12.46□□□□□ -0.42
SHANK1-204ENST00000391814 MYO7BQ6PIF6 2116 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 NDUFB1O75438 58 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 MIR7-3HGQ8N6C7 128 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 H3BQ85 93 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 LINC00322Q6ZN03 302 aaPredicted RBP12.45□□□□□ -0.42
SHANK1-204ENST00000391814 FAM110AQ9BQ89 295 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 CAMK2N2Q96S95 79 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
SHANK1-204ENST00000391814 COX7A2LO14548 114 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 A0A0J9YXY3 114 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 SPTA1P02549 2419 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 NDUFA7O95182 113 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 MAPKAPK5-AS1Q8N8E1 139 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 SEC61GP60059 68 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 HIGD2BQ4VC39 106 aa12.44□□□□□ -0.42
SHANK1-204ENST00000391814 CEMP1Q6PRD7 247 aaPredicted RBP12.44□□□□□ -0.42
SHANK1-204ENST00000391814 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 IGKV1-17P01599 117 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 FAM240AA0A1B0GVK7 77 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 E7EUB6 86 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
SHANK1-204ENST00000391814 Q6ZS92 163 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
SHANK1-204ENST00000391814 H0Y9J4 135 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 DEFB1P60022 68 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 TRBV6-1A0A0K0K1D8 114 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 CTSGP08311 255 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 SEM1Q6ZVN7 128 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 EML6Q6ZMW3 1958 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 H3BUA1 57 aa12.42□□□□□ -0.42
SHANK1-204ENST00000391814 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
SHANK1-204ENST00000391814 GYPEP15421 78 aa12.41□□□□□ -0.42
SHANK1-204ENST00000391814 SCXQ7RTU7 201 aa12.41□□□□□ -0.42
SHANK1-204ENST00000391814 ARHGAP21Q5T5U3 1957 aa12.41□□□□□ -0.42
SHANK1-204ENST00000391814 UBE2AP49459 152 aa12.41□□□□□ -0.42
SHANK1-204ENST00000391814 HEATR1Q9H583 2144 aaKnown RBP12.41□□□□□ -0.42
SHANK1-204ENST00000391814 M0QXV9 152 aa12.41□□□□□ -0.42
SHANK1-204ENST00000391814 CACNA1GO43497 2377 aa12.4□□□□□ -0.42
SHANK1-204ENST00000391814 TANC1Q9C0D5 1861 aa12.4□□□□□ -0.42
SHANK1-204ENST00000391814 SLPIP03973 132 aa12.4□□□□□ -0.42
SHANK1-204ENST00000391814 MED12Q93074 2177 aa12.4□□□□□ -0.42
SHANK1-204ENST00000391814 PIK3CD-AS1Q5SR53 167 aa12.4□□□□□ -0.43
SHANK1-204ENST00000391814 Q6ZSR3 168 aa12.4□□□□□ -0.43
SHANK1-204ENST00000391814 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 SLURP1P55000 103 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 TRIAP1O43715 76 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 IGKV4-1P06312 121 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 FAM186AA6NE01 2351 aa12.39□□□□□ -0.43
SHANK1-204ENST00000391814 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 DIRC1Q969H9 104 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 U3KQA8 63 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 LRCOL1A6NCL2 159 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 NEXN-AS1Q8NBZ9 246 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 ZNF80P51504 273 aaPredicted RBP12.38□□□□□ -0.43
SHANK1-204ENST00000391814 SNURFQ9Y675 71 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 ZDBF2Q9HCK1 2354 aa12.38□□□□□ -0.43
SHANK1-204ENST00000391814 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 GATA3P23771 443 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 XGP55808 180 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 AJUBAQ96IF1 538 aa12.37□□□□□ -0.43
SHANK1-204ENST00000391814 INTS1Q8N201 2190 aaKnown RBP12.36□□□□□ -0.43
SHANK1-204ENST00000391814 INSL3P51460 131 aa12.36□□□□□ -0.43
SHANK1-204ENST00000391814 DENND4CQ5VZ89 1909 aa12.36□□□□□ -0.43
SHANK1-204ENST00000391814 THSD7BQ9C0I4 1608 aa12.35□□□□□ -0.43
SHANK1-204ENST00000391814 P0DMU3 169 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms