RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 FOXI2Q6ZQN5 318 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 OR9G4Q8NGQ1 327 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 SCGB3A1Q96QR1 104 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 ZMAT4Q9H898 229 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 COX11Q9Y6N1 276 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 SETD2Q9BYW2 2564 aaPredicted RBP14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 DPM2O94777 84 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 ZC2HC1BQ5TFG8 222 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 AMTNQ6UX39 209 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 ODF3Q96PU9 254 aa14.24□□□□□ -0.13
PCDHA4-201ENST00000378125 ITPR2Q14571 2701 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 DUSP14O95147 198 aaKnown RBP14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 RBMY1A1P0DJD3 496 aaKnown RBP14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 RBMY1CP0DJD4 496 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 RBMY1FQ15415 496 aaKnown RBP14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 ORMDL2Q53FV1 153 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 C4orf3Q8WVX3 66 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 CBY3A6NI87 242 aa14.23□□□□□ -0.13
PCDHA4-201ENST00000378125 C9orf85Q96MD7 179 aa14.22□□□□□ -0.13
PCDHA4-201ENST00000378125 C2orf66Q6UXQ4 117 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 WNK1Q9H4A3 2382 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 GAGE1Q13065 139 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 TMEM97Q5BJF2 176 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 DYNLRB2Q8TF09 96 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 TOMM6Q96B49 74 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 PEMTQ9UBM1 199 aa14.21□□□□□ -0.13
PCDHA4-201ENST00000378125 A0A087WX48 190 aa14.2□□□□□ -0.14
PCDHA4-201ENST00000378125 TAX1BP3O14907 124 aa14.2□□□□□ -0.14
PCDHA4-201ENST00000378125 ZNF56Q15929 161 aa14.2□□□□□ -0.14
PCDHA4-201ENST00000378125 POM121L12Q8N7R1 296 aa14.2□□□□□ -0.14
PCDHA4-201ENST00000378125 HELZ2Q9BYK8 2649 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-201ENST00000378125 RBMY1BA6NDE4 496 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 RBMY1EA6NEQ0 496 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 RBMY1DP0C7P1 496 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 ORAOV1Q8WV07 137 aa14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 ZNF876PQ49A33 203 aa14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 YAE1D1Q9NRH1 226 aa14.19□□□□□ -0.14
PCDHA4-201ENST00000378125 ZNF256Q9Y2P7 627 aaPredicted RBP14.18□□□□□ -0.14
PCDHA4-201ENST00000378125 PLA2G2AP14555 144 aa14.18□□□□□ -0.14
PCDHA4-201ENST00000378125 CD300EQ496F6 205 aaPredicted RBP14.18□□□□□ -0.14
PCDHA4-201ENST00000378125 SYT8Q8NBV8 401 aa14.18□□□□□ -0.14
PCDHA4-201ENST00000378125 IGHV3-73A0A0B4J1V6 119 aa14.17□□□□□ -0.14
PCDHA4-201ENST00000378125 H3BMM0 161 aa14.17□□□□□ -0.14
PCDHA4-201ENST00000378125 NIPBLQ6KC79 2804 aaeCLIP14.17□□□□□ -0.14
PCDHA4-201ENST00000378125 MTORP42345 2549 aa14.17□□□□□ -0.14
PCDHA4-201ENST00000378125 SDHAF1A6NFY7 115 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 CCL25O15444 150 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 PPP1R17O96001 155 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 CRYGDP07320 174 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 CD28P10747 220 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 RPL39P62891 51 aaKnown RBP14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 RAX2Q96IS3 184 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 HLA-DRB4P13762 266 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 BAALCQ8WXS3 180 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 CHTOPQ9Y3Y2 248 aaKnown RBP14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 HLA-DRB4X5D2U9 266 aa14.16□□□□□ -0.14
PCDHA4-201ENST00000378125 PTTG1IPP53801 180 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 VAMP3Q15836 100 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 DEFB114Q30KQ6 69 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 TMEM86BQ8N661 226 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 MAP6D1Q9H9H5 199 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 TP53TG1Q9Y2A0 90 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 H7C1H1 209 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 J3QKU1 62 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 POLR2KP53803 58 aaKnown RBP14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 MORN3Q6PF18 240 aaPredicted RBP14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 NEXN-AS1Q8NBZ9 246 aa14.15□□□□□ -0.14
PCDHA4-201ENST00000378125 KRTAP1-1Q07627 177 aa14.14□□□□□ -0.15
PCDHA4-201ENST00000378125 ZFP2Q6ZN57 461 aa14.14□□□□□ -0.15
PCDHA4-201ENST00000378125 F8VRH5 84 aa14.14□□□□□ -0.15
PCDHA4-201ENST00000378125 MAPKAPK5-AS1Q8N8E1 139 aa14.14□□□□□ -0.15
PCDHA4-201ENST00000378125 EMP1P54849 157 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 TRGV11A0A075B6L2 103 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 K7EMI3 77 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 M0QY20 66 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 VCYO14598 125 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 KIR2DL4Q99706 377 aa14.13□□□□□ -0.15
PCDHA4-201ENST00000378125 TRAV12-1A0A0B4J245 112 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 PRSS29PA6NIE9 313 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 K7EP13 123 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 PLNP26678 52 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 PROK1P58294 105 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 CYSLTR1Q9Y271 337 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 SIVA1O15304 175 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 HSD52Q0P140 79 aa14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 CITED2Q99967 270 aaPredicted RBP14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 NAA38Q9BRA0 125 aaKnown RBP14.12□□□□□ -0.15
PCDHA4-201ENST00000378125 TSHBP01222 138 aa14.11□□□□□ -0.15
PCDHA4-201ENST00000378125 UBE2V1Q13404 147 aa14.11□□□□□ -0.15
PCDHA4-201ENST00000378125 KMT2BQ9UMN6 2715 aaPredicted RBP14.11□□□□□ -0.15
PCDHA4-201ENST00000378125 TRBV25-1A0A075B6N4 114 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 P0DMU3 169 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 FAM231AP0DMU4 169 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 FAM231CP0DMU5 169 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 RAB37Q96AX2 223 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 UNC79Q9P2D8 2635 aa14.1□□□□□ -0.15
PCDHA4-201ENST00000378125 ANK3Q12955 4377 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms