RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
CRNKL1-201ENST00000377327 ATP5J2P56134 94 aa6.97□□□□□ -1.29
CRNKL1-201ENST00000377327 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
CRNKL1-201ENST00000377327 A0A096LNJ9 63 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 IGHV7-81A0A0B4J1V7 117 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 LGALS9O00182 355 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 RPL32P62910 135 aaKnown RBP6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 LINC00643Q86TS7 51 aa6.96□□□□□ -1.29
CRNKL1-201ENST00000377327 Q71RC1 249 aaPredicted RBP6.96□□□□□ -1.3
CRNKL1-201ENST00000377327 PEMTQ9UBM1 199 aa6.96□□□□□ -1.3
CRNKL1-201ENST00000377327 CCDC179H3BU77 68 aa6.96□□□□□ -1.3
CRNKL1-201ENST00000377327 H3BUX3 64 aa6.96□□□□□ -1.3
CRNKL1-201ENST00000377327 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
CRNKL1-201ENST00000377327 A0A1B0GX51 115 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-33P01772 117 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 BRD3OSQ6XYD6 125 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 UBL5Q9BZL1 73 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 Q9H8V8 135 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 LTBP2Q14767 1821 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 ATP5G1P05496 136 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 C10orf142B7Z368 130 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 HERVK_113P63121 156 aa6.95□□□□□ -1.3
CRNKL1-201ENST00000377327 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 UQCRQO14949 82 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 SPRY4Q9C004 299 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 P0DMU3 169 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 IGFL3Q6UXB1 125 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 STHQ8IWL8 128 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 ANKHD1Q8IWZ3 2542 aaKnown RBP6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
CRNKL1-201ENST00000377327 TRGV4A0A0C4DH28 118 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-30-3P0DP02 117 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 JPT2Q9H910 190 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 WISP2O76076 250 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 CRYGBP07316 175 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 NRACQ8N912 160 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV1-69P01742 117 aa6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
CRNKL1-201ENST00000377327 C2CD3Q4AC94 2353 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-53P01767 116 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-30P01768 117 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV3-30-5P0DP03 117 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 RBMY1FQ15415 496 aaKnown RBP6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 SEM1Q6ZVN7 128 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 DAND5Q8N907 189 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 DEFB131AP59861 70 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 CNFNQ9BYD5 112 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 PFN2P35080 140 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGHV1-58A0A0C4DH39 117 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 MALP21145 153 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGFL2Q6UWQ7 119 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 PIP4P2Q8N4L2 257 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 ZNRF2Q8NHG8 242 aa6.92□□□□□ -1.3
CRNKL1-201ENST00000377327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 IGKV2-29A2NJV5 120 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 TRIAP1O43715 76 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 UBE2D1P51668 147 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 Q6Q795 121 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 Q8N9W7 124 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 CUL9Q8IWT3 2517 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 INSP01308 110 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 BPESC1Q9GZL8 116 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
CRNKL1-201ENST00000377327 HAMPP81172 84 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 RUSC1-AS1Q66K80 236 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 AGRNO00468 2067 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 HOXD3P31249 432 aaPredicted RBP6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 DEFB1P60022 68 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 MIAQ16674 131 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 CCL19Q99731 98 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 NACAE9PAV3 2078 aa6.9□□□□□ -1.3
CRNKL1-201ENST00000377327 FSTL3O95633 263 aa6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 HOXB4P17483 251 aaPredicted RBP6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 CDIP1Q9H305 208 aa6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 UBE2D3P61077 147 aa6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 UBE2D2P62837 147 aa6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 PRR30Q53SZ7 412 aaPredicted RBP6.9□□□□□ -1.31
CRNKL1-201ENST00000377327 H0YGX0 51 aa6.89□□□□□ -1.31
CRNKL1-201ENST00000377327 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
CRNKL1-201ENST00000377327 SMAD5-AS1Q9Y6J3 95 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms