RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 F8VRH5 84 aa12.94□□□□□ -0.34
TRIM27-201ENST00000377194 TCL1BO95988 128 aa12.94□□□□□ -0.34
TRIM27-201ENST00000377194 PRR9Q5T870 116 aa12.94□□□□□ -0.34
TRIM27-201ENST00000377194 TEN1Q86WV5 123 aa12.94□□□□□ -0.34
TRIM27-201ENST00000377194 PRADC1Q9BSG0 188 aa12.94□□□□□ -0.34
TRIM27-201ENST00000377194 B4DSR2 109 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 H7C1H1 209 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 NDUFA4O00483 81 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 GAGE5Q13069 117 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 GAGE6Q13070 117 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 TMEM95Q3KNT9 176 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
TRIM27-201ENST00000377194 PTPN13Q12923 2485 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 SPRY2O43597 315 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 USMG5Q96IX5 58 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 SLC25A16P16260 332 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
TRIM27-201ENST00000377194 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 IGHV7-4-1A0A0J9YVY3 117 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 IGLV1-40P01703 118 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 J3KRW8 73 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 SOCS3O14543 225 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 BRI3O95415 125 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 MAPK1IP1LQ8NDC0 245 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
TRIM27-201ENST00000377194 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
TRIM27-201ENST00000377194 EDN2P20800 178 aa12.9□□□□□ -0.34
TRIM27-201ENST00000377194 C9orf139Q6ZV77 190 aa12.9□□□□□ -0.34
TRIM27-201ENST00000377194 H3BUA1 57 aa12.9□□□□□ -0.34
TRIM27-201ENST00000377194 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
TRIM27-201ENST00000377194 SHISA2Q6UWI4 295 aa12.9□□□□□ -0.34
TRIM27-201ENST00000377194 UBE2D1P51668 147 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 EMP1P54849 157 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 UBE2D3P61077 147 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 UBE2D2P62837 147 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 TRAV12-1A0A0B4J245 112 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 A6NJY4 79 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 A8MWV9 139 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 LINC01619G3V211 115 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
TRIM27-201ENST00000377194 CFHR3Q02985 330 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 CFAP161Q6P656 301 aa12.89□□□□□ -0.35
TRIM27-201ENST00000377194 F6UB75 175 aa12.88□□□□□ -0.35
TRIM27-201ENST00000377194 BBC3Q96PG8 261 aaPredicted RBP12.88□□□□□ -0.35
TRIM27-201ENST00000377194 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
TRIM27-201ENST00000377194 C10orf99Q6UWK7 81 aa12.88□□□□□ -0.35
TRIM27-201ENST00000377194 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
TRIM27-201ENST00000377194 ABCA12Q86UK0 2595 aa12.88□□□□□ -0.35
TRIM27-201ENST00000377194 SCGB1C2P0DMR2 95 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 ZFAND2AQ8N6M9 145 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 RHPN1-AS1Q9BWJ2 59 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 MXRA5Q9NR99 2828 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 A0A096LNT2 108 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
TRIM27-201ENST00000377194 CD7P09564 240 aa12.86□□□□□ -0.35
TRIM27-201ENST00000377194 SRD5A1P18405 259 aa12.86□□□□□ -0.35
TRIM27-201ENST00000377194 NDUFA11Q86Y39 141 aa12.86□□□□□ -0.35
TRIM27-201ENST00000377194 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
TRIM27-201ENST00000377194 RASL10AQ92737 203 aa12.86□□□□□ -0.35
TRIM27-201ENST00000377194 CRLF1O75462 422 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 HERV-K104P63124 156 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 LINC00477Q96M19 166 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 CITED1Q99966 193 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 SMIM20Q8N5G0 67 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 TOMM6Q96B49 74 aa12.85□□□□□ -0.35
TRIM27-201ENST00000377194 DSCR9P59020 149 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 LINC01356Q8N9X3 169 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 RPL39LQ96EH5 51 aaKnown RBP12.84□□□□□ -0.35
TRIM27-201ENST00000377194 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
TRIM27-201ENST00000377194 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 H7C2G1 150 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
TRIM27-201ENST00000377194 UBR5O95071 2799 aaPredicted RBP12.84□□□□□ -0.35
TRIM27-201ENST00000377194 PSMB8P28062 276 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 ORMDL2Q53FV1 153 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 TRPT1Q86TN4 253 aaKnown RBP12.83□□□□□ -0.36
TRIM27-201ENST00000377194 IGHV4-4A0A075B6R2 117 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 C9JAW5 83 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 OVOL1O14753 267 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 CFC1BP0CG36 223 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 CFC1P0CG37 223 aa12.83□□□□□ -0.36
TRIM27-201ENST00000377194 NAV2Q8IVL1 2488 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 COX6B1P14854 86 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 NDUFV3P56181 108 aaKnown RBP12.82□□□□□ -0.36
TRIM27-201ENST00000377194 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE2BQ13066 116 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE2EQ4V326 116 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 GAGE2DQ9UEU5 116 aa12.82□□□□□ -0.36
TRIM27-201ENST00000377194 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms